RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 UBAP2LQ14157 1087 aaKnown RBP14.8□□□□□ -0.04
CCT4-201ENST00000394440 SH2D4BQ5SQS7 431 aa14.8□□□□□ -0.04
CCT4-201ENST00000394440 METTL21CQ5VZV1 264 aa14.8□□□□□ -0.04
CCT4-201ENST00000394440 NAIF1Q69YI7 327 aaPredicted RBP14.8□□□□□ -0.04
CCT4-201ENST00000394440 CUZD1Q86UP6 607 aa14.8□□□□□ -0.04
CCT4-201ENST00000394440 SFTPA1Q8IWL2 248 aa14.8□□□□□ -0.04
CCT4-201ENST00000394440 NAT14Q8WUY8 206 aa14.8□□□□□ -0.04
CCT4-201ENST00000394440 MAELQ96JY0 434 aaKnown RBP14.8□□□□□ -0.04
CCT4-201ENST00000394440 EML4Q9HC35 981 aaKnown RBP14.8□□□□□ -0.04
CCT4-201ENST00000394440 SMOXQ9NWM0 555 aa14.8□□□□□ -0.04
CCT4-201ENST00000394440 C16orf96A6NNT2 1141 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 SYCE1LA8MT33 242 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 UBFD1O14562 309 aaKnown RBP14.79□□□□□ -0.04
CCT4-201ENST00000394440 KRT16P08779 473 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 NSG1P42857 185 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 PFKFB4Q16877 469 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 PARS2Q7L3T8 475 aaKnown RBP14.79□□□□□ -0.04
CCT4-201ENST00000394440 HSD11B1LQ7Z5J1 315 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 CPA6Q8N4T0 437 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 ULK4Q96C45 1275 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 C1QTNF3Q9BXJ4 246 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 NUF2Q9BZD4 464 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 S1PR5Q9H228 398 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 TMEM245Q9H330 911 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 SARS2Q9NP81 518 aaKnown RBP14.79□□□□□ -0.04
CCT4-201ENST00000394440 TCF7L2Q9NQB0 619 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 LATS2Q9NRM7 1088 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 SUPT7LO94864 414 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 SIX3O95343 332 aaPredicted RBP14.79□□□□□ -0.04
CCT4-201ENST00000394440 NFKBIAP25963 317 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 GJA4P35212 333 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 MMP12P39900 470 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 ELF3P78545 371 aaPredicted RBP14.79□□□□□ -0.04
CCT4-201ENST00000394440 ZNF234Q14588 700 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 C9orf64Q5T6V5 341 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 FBXW10Q5XX13 1052 aa14.79□□□□□ -0.04
CCT4-201ENST00000394440 EDDM13A0A1B0GTR0 161 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 SUPT3HB4E1H0 165 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 STX16-NPEPL1H3BU86 382 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 STX16O14662 325 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 SUPT3HO75486 399 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 RPS17P08708 135 aaKnown RBP14.78□□□□□ -0.04
CCT4-201ENST00000394440 HLA-EP13747 358 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 HK3P52790 923 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 GRM2Q14416 872 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 FNDC3BQ53EP0 1204 aaKnown RBP14.78□□□□□ -0.04
CCT4-201ENST00000394440 GPRC6AQ5T6X5 926 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 FBXO39Q8N4B4 442 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 DEFB123Q8N688 67 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 COPS8Q99627 209 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 MIPEPQ99797 713 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 CCDC28BQ9BUN5 200 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 RASSF4Q9H2L5 321 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 WDR55Q9H6Y2 383 aaPredicted RBP14.78□□□□□ -0.04
CCT4-201ENST00000394440 GTSE1Q9NYZ3 720 aa14.78□□□□□ -0.04
CCT4-201ENST00000394440 LRRC14BA6NHZ5 514 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 SPINT1O43278 529 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 SLC25A14O95258 325 aaPredicted RBP14.77□□□□□ -0.04
CCT4-201ENST00000394440 PRNPP04156 253 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 ESRRAP11474 423 aaPredicted RBP14.77□□□□□ -0.04
CCT4-201ENST00000394440 GFAPP14136 432 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 PSMC3P17980 439 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 EPHA3P29320 983 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 EIF2DP41214 584 aaKnown RBP14.77□□□□□ -0.04
CCT4-201ENST00000394440 LSM12Q3MHD2 195 aaKnown RBP14.77□□□□□ -0.04
CCT4-201ENST00000394440 ATAT1Q5SQI0 421 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 CYB5D1Q6P9G0 228 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 RAB44Q7Z6P3 723 aaPredicted RBP14.77□□□□□ -0.04
CCT4-201ENST00000394440 KIRREL3Q8IZU9 778 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 TMIEQ8NEW7 156 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 ELSPBP1Q96BH3 223 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 FAR2Q96K12 515 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 ASB2Q96Q27 587 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 TBC1D10AQ9BXI6 508 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 TAGLN3Q9UI15 199 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 CD84Q9UIB8 345 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 HCN2Q9UL51 889 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 PPM1HQ9ULR3 514 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 CKAP5Q14008 2032 aa14.77□□□□□ -0.04
CCT4-201ENST00000394440 SDHDO14521 159 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 TBX10O75333 385 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 GM2AP17900 193 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 PDCD2Q16342 344 aaPredicted RBP14.77□□□□□ -0.05
CCT4-201ENST00000394440 HENMT1Q5T8I9 393 aaKnown RBP14.77□□□□□ -0.05
CCT4-201ENST00000394440 SBSNQ6UWP8 590 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 Q6ZVL8 140 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 Q7L0L9 218 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 TECPR1Q7Z6L1 1165 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 ZNF385DQ9H6B1 395 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 TMCO1Q9UM00 188 aa14.77□□□□□ -0.05
CCT4-201ENST00000394440 GOLGA8QA0A0J9YX86 632 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 RGSL1A5PLK6 1076 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 GOLGA8OA6NCC3 632 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 E9PBE3 544 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 GOLGA8NF8WBI6 632 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 KLHL41O60662 606 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 CDK14O94921 469 aa14.76□□□□□ -0.05
CCT4-201ENST00000394440 ENO1P06733 434 aaKnown RBP14.76□□□□□ -0.05
CCT4-201ENST00000394440 LAMP2P13473 410 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms