RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 IMP4Q96G21 291 aaKnown RBP17.85■□□□□ 0.45
ERCC2-201ENST00000391941 MYOCQ99972 504 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 SEMA3CQ99985 751 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 FUNDC2Q9BWH2 189 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 YIPF2Q9BWQ6 316 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 FBXO10Q9UK96 956 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 FNDC1Q4ZHG4 1894 aaPredicted RBP17.85■□□□□ 0.45
ERCC2-201ENST00000391941 SMIM35A0A1B0GVV1 85 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 BTN3A1O00481 513 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 SLC22A3O75751 556 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 RHOBTB1O94844 696 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 B3GALT4O96024 378 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 MYL3P08590 195 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 MBL2P11226 248 aaPredicted RBP17.85■□□□□ 0.45
ERCC2-201ENST00000391941 BMP1P13497 986 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 CYP4B1P13584 511 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 SFSWAPQ12872 951 aaKnown RBP17.85■□□□□ 0.45
ERCC2-201ENST00000391941 SPIDRQ14159 915 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 RGS21Q2M5E4 152 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 USP51Q70EK9 711 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 DSG4Q86SJ6 1040 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 GPRC5AQ8NFJ5 357 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 ABHD11Q8NFV4 315 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.85■□□□□ 0.45
ERCC2-201ENST00000391941 TAMM41Q96BW9 452 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 ZBED2Q9BTP6 218 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 AMBRA1Q9C0C7 1298 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 IKZF5Q9H5V7 419 aa17.85■□□□□ 0.45
ERCC2-201ENST00000391941 PAK1IP1Q9NWT1 392 aaPredicted RBP17.85■□□□□ 0.45
ERCC2-201ENST00000391941 SULT1C4O75897 302 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 GPIP06744 558 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 CDC42EP1Q00587 391 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 MOGQ16653 247 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 SETMARQ53H47 684 aaPredicted RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 TMEM236Q5W0B7 351 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 ZNF773Q6PK81 442 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 GALNT5Q7Z7M9 940 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 SPARTQ8N0X7 666 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 CNIH3Q8TBE1 160 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 SLC25A51Q9H1U9 297 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 CATSPERBQ9H7T0 1116 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 BPIFA1Q9NP55 256 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 ZNF236Q9UL36 1845 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 KRBA1A5PL33 1030 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 SNAP91O60641 907 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 BCAS1O75363 584 aaPredicted RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 GLP2RO95838 553 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 ATXN1LP0C7T5 689 aaKnown RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 HOXD8P13378 290 aaPredicted RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 FDXRP22570 491 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 DGCR6Q14129 220 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 RCAN2Q14206 197 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 DDR2Q16832 855 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 CRTC3Q6UUV7 619 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 CFAP52Q8N1V2 620 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 RTL3Q8N8U3 475 aaKnown RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 ZFP90Q8TF47 636 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 CCDC97Q96F63 343 aaPredicted RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 NSMCE2Q96MF7 247 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 GPR21Q99679 349 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 HEPHQ9BQS7 1158 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 INTS10Q9NVR2 710 aaKnown RBP17.84■□□□□ 0.45
ERCC2-201ENST00000391941 MED16Q9Y2X0 877 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 PTCH2Q9Y6C5 1203 aa17.84■□□□□ 0.45
ERCC2-201ENST00000391941 ARL5CA6NH57 179 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 DFNA5O60443 496 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 C1QCP02747 245 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 CNPP09543 421 aaKnown RBP17.83■□□□□ 0.45
ERCC2-201ENST00000391941 MAGP20916 626 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 NFKB2Q00653 900 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 MFSD10Q14728 455 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 PCBP1Q15365 356 aaKnown RBP eCLIP17.83■□□□□ 0.45
ERCC2-201ENST00000391941 TRIM16LQ309B1 348 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 GTDC1Q4AE62 458 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 SPESP1Q6UW49 350 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 MILR1Q7Z6M3 343 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 RAB44Q7Z6P3 723 aaPredicted RBP17.83■□□□□ 0.45
ERCC2-201ENST00000391941 TMEM179BQ7Z7N9 219 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 SIDT2Q8NBJ9 832 aaKnown RBP17.83■□□□□ 0.45
ERCC2-201ENST00000391941 PROKR1Q8TCW9 393 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 IGSF8Q969P0 613 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 NSMCE3Q96MG7 304 aa17.83■□□□□ 0.45
ERCC2-201ENST00000391941 GOLGA8CPA6NN73 597 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 NIPSNAP2O75323 286 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 CLPXO76031 633 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 THP07101 528 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 FGF4P08620 206 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 G6PDP11413 515 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 IDO1P14902 403 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 ITGB6P18564 788 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 TTKP33981 857 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 FSCN1Q16658 493 aaKnown RBP17.83■□□□□ 0.44
ERCC2-201ENST00000391941 MANEALQ5VSG8 457 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 TIGD7Q6NT04 549 aaPredicted RBP17.83■□□□□ 0.44
ERCC2-201ENST00000391941 PHACTR4Q8IZ21 702 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 CLHC1Q8NHS4 586 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 HGH1Q9BTY7 390 aa17.83■□□□□ 0.44
ERCC2-201ENST00000391941 TDRD1Q9BXT4 1180 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms