RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 NEFHP12036 1026 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 ENO3P13929 434 aaPredicted RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 ZNF37AP17032 561 aaPredicted RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 TAC1P20366 129 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 DGKAP23743 735 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 ETV4P43268 484 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 MAPK9P45984 424 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 TPMTP51580 245 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CCR3P51677 355 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 GNGT1P63211 74 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CBX1P83916 185 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 ZXDAP98168 799 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 FZD5Q13467 585 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 MPP2Q14168 576 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 TMEM259Q4ZIN3 620 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 PPM1JQ5JR12 505 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CTSL3PQ5NE16 218 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 N4BP2L1Q5TBK1 243 aaPredicted RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 MAMSTRQ6ZN01 415 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 Q6ZS52 159 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 TRIM67Q6ZTA4 783 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CACUL1Q86Y37 369 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CEP97Q8IW35 865 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 DENND6BQ8NEG7 585 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 ACVR1CQ8NER5 493 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 MGARPQ8TDB4 240 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CKAP2Q8WWK9 683 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 ERLEC1Q96DZ1 483 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 CCDC126Q96EE4 140 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 PDLIM5Q96HC4 596 aaKnown RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 SCYL1Q96KG9 808 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 UBXN10Q96LJ8 280 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 MAGEB18Q96M61 343 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 FAM111AQ96PZ2 611 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 GPR21Q99679 349 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 PAIP2Q9BPZ3 127 aaKnown RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 DERL2Q9GZP9 239 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 PCED1AQ9H1Q7 454 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 MRPL46Q9H2W6 279 aaKnown RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 PHPT1Q9NRX4 125 aaPredicted RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 SLC17A7Q9P2U7 560 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 SERGEFQ9UGK8 458 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 TMCO1Q9UM00 188 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 COQ6Q9Y2Z9 468 aa8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 TCF20Q9UGU0 1960 aaKnown RBP8.75□□□□□ -1.01
RNU1-28P-201ENST00000383861 SHOX2O60902 331 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 NIPSNAP2O75323 286 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 TRIM16O95361 564 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 WISP3O95389 354 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 PAK4O96013 591 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 PROCP04070 461 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 HOXC4P09017 264 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CPA3P15088 417 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 SERPINB4P48594 390 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CCR5P51681 352 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CLCN7P51798 805 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 GYS2P54840 703 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 WDR4P57081 412 aaKnown RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 NAA20P61599 178 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 GUCY1A3Q02108 690 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 PLOD1Q02809 727 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 SIGLEC14Q08ET2 396 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 TMEM115Q12893 351 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CSHL1Q14406 222 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 PDK4Q16654 411 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 WSCD2Q2TBF2 565 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 BCL7AQ4VC05 210 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 PLEKHS1Q5SXH7 462 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 ATG16L1Q676U5 607 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 RGS9BPQ6ZS82 235 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CDHR3Q6ZTQ4 885 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 OTOAQ7RTW8 1153 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 NUDCD3Q8IVD9 361 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 SLC22A9Q8IVM8 553 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CENPLQ8N0S6 344 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 ZBTB2Q8N680 514 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 ARMC2Q8NEN0 867 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 RHEBL1Q8TAI7 183 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 STAG3L4Q8TBR4 150 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 CD200R1Q8TD46 325 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 LRRC8CQ8TDW0 803 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 KCTD4Q8WVF5 259 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 NXNL1Q96CM4 212 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 BOCQ9BWV1 1114 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 C1QTNF1Q9BXJ1 281 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 TEX101Q9BY14 249 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 FOXQ1Q9C009 403 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 SLC6A17Q9H1V8 727 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 TFB2MQ9H5Q4 396 aaKnown RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 RMI1Q9H9A7 625 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 TMEM216Q9P0N5 145 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 TMPRSS11EQ9UL52 423 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 GPR34Q9UPC5 381 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 ZFR2Q9UPR6 939 aaKnown RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 DMTF1Q9Y222 760 aa8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 MTF2Q9Y483 593 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
RNU1-28P-201ENST00000383861 ZNF106Q9H2Y7 1883 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms