RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SEMA3AQ14563 771 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 C18orf21Q32NC0 220 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 PAQR3Q6TCH7 311 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 CYP2U1Q7Z449 544 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 MILR1Q7Z6M3 343 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 BPHLQ86WA6 291 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 EPHX4Q8IUS5 362 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 DEPDC4Q8N2C3 294 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 ANKK1Q8NFD2 765 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 OR2T34Q8NGX1 318 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 OR2T3Q8NH03 318 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 HOXD1Q9GZZ0 328 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 GALPQ9UBC7 116 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 VPS28Q9UK41 221 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 COL1A2P08123 1366 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 TAF4O00268 1085 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 XYLBO75191 536 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 F2P00734 622 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 RBP1P09455 135 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 TTKP33981 857 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 UFM1P61960 85 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 FPGSQ05932 587 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 AQP6Q13520 282 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 LAPTM5Q13571 262 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 FRG1Q14331 258 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 ZNF846Q147U1 533 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 POLD3Q15054 466 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 SIRPB2Q5JXA9 342 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 UGT3A1Q6NUS8 523 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 CILP2Q8IUL8 1156 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 SLC38A6Q8IZM9 456 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 MIER2Q8N344 545 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 C17orf80Q9BSJ5 609 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 DGCR6LQ9BY27 220 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 LHPPQ9H008 270 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 ATP13A3Q9H7F0 1226 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 INTS7Q9NVH2 962 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 RNF112Q9ULX5 631 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 PCDHGA11Q9Y5H2 935 aa12.36□□□□□ -0.43
PRPF40B-202ENST00000380281 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 CXCR2P25025 360 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 PBX3P40426 434 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 SEMG2Q02383 582 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 MAPRE2Q15555 327 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 ANKRD34AQ69YU3 496 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 PM20D1Q6GTS8 502 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 PELI3Q8N2H9 469 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 SUN5Q8TC36 379 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 MIR1-1HGQ9H1L0 117 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 CMTM6Q9NX76 183 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 ZMYM5Q9UJ78 669 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 A0A087X1B8 175 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 BTN3A1O00481 513 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 AZIN1O14977 448 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 NPHS1O60500 1241 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 SYNCRIPO60506 623 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 GUCA1CO95843 209 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 SLC2A3P11169 496 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 PSMA4P25789 261 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 ALDH4A1P30038 563 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 SLC7A1P30825 629 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 LSM3P62310 102 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 SCAPQ12770 1279 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 PAGE3Q5JUK9 113 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 ZNF678Q5SXM1 525 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 HS3ST5Q8IZT8 346 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 TCF12Q99081 682 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 CCDC90BQ9GZT6 254 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 HMG20AQ9NP66 347 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 IFT80Q9P2H3 777 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 RABL2AQ9UBK7 228 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 CDH9Q9ULB4 789 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 U3KQV3 271 aa12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 ZFC3H1O60293 1989 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-202ENST00000380281 ILVBLA1L0T0 632 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 CCRL2O00421 344 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 GLP2RO95838 553 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 FASP25445 335 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 DGKQP52824 942 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 MTPNP58546 118 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 PHC1P78364 1004 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 IMPG1Q17R60 797 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 PAGE2BQ5JRK9 111 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 C10orf120Q5SQS8 335 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 ABRAXAS1Q6UWZ7 409 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 TERB1Q8NA31 727 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
PRPF40B-202ENST00000380281 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms