RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 PCDHB9Q9Y5E1 797 aa21.34■■□□□ 1.01
TRIM54-202ENST00000380075 E5RI56 91 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 FBP2O00757 339 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 MRASO14807 208 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 PIP5K1BO14986 540 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 RFPL2O75678 378 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 TSPAN12O95859 305 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 C8AP07357 584 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 GPX3P22352 226 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 LTBRP36941 435 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 TRAP1Q12931 704 aaKnown RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 CAPRIN2Q6IMN6 1127 aaKnown RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 C12orf76Q8N812 135 aaPredicted RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 BHLHE22Q8NFJ8 381 aaPredicted RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 ZNF483Q8TF39 744 aaPredicted RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 PDLIM5Q96HC4 596 aaKnown RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 BTBD9Q96Q07 612 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 SLC22A12Q96S37 553 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 ADA2Q9NZK5 511 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 CLEC1BQ9P126 229 aa21.33■■□□□ 1.01
TRIM54-202ENST00000380075 FCF1Q9Y324 198 aaKnown RBP21.33■■□□□ 1.01
TRIM54-202ENST00000380075 CXorf51AA0A1B0GTR3 108 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 NPEPPSL1A6NEC2 478 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 CDC7O00311 574 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 MATN4O95460 622 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 LBPP18428 481 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 PEX2P28328 305 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 MRPL19P49406 292 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 UCMAQ8WVF2 138 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 MRPS31Q92665 395 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 NSUN5Q96P11 429 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 SMIM14Q96QK8 99 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 CCT7Q99832 543 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 P2RY12Q9H244 342 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 BPIFA1Q9NP55 256 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 CROTQ9UKG9 612 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 PACSIN3Q9UKS6 424 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 PRMT5O14744 637 aaPredicted RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 NIPSNAP2O75323 286 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 CRCPO75575 148 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 CHEK2O96017 543 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 ALDOCP09972 364 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 CHRM3P20309 590 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 MS4A2Q01362 244 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 TRIM25Q14258 630 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 KIF19Q2TAC6 998 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 RARS2Q5T160 578 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 OGFOD2Q6N063 350 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 C8orf82Q6P1X6 216 aaPredicted RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 TAS2R42Q7RTR8 314 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 GPSM1Q86YR5 675 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 PHYKPLQ8IUZ5 450 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 MIER2Q8N344 545 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 SIDT2Q8NBJ9 832 aaKnown RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 MAFAQ8NHW3 353 aaPredicted RBP21.32■■□□□ 1
TRIM54-202ENST00000380075 PIH1D2Q8WWB5 315 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 LINGO1Q96FE5 620 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 DPP7Q9UHL4 492 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 IKZF3Q9UKT9 509 aa21.32■■□□□ 1
TRIM54-202ENST00000380075 ATP6AP2A0A1C7CYW4 349 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 LRRC14BA6NHZ5 514 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 TRIM24O15164 1050 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 OR1I1O60431 355 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 SNX2O60749 519 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 SOCS5O75159 536 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 ATP6AP2O75787 350 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 ESRRBO95718 433 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 RPS3P23396 243 aaKnown RBP eCLIP21.31■■□□□ 1
TRIM54-202ENST00000380075 SLC7A9P82251 487 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 GRIK2Q13002 908 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 SAMD4BQ5PRF9 694 aaKnown RBP21.31■■□□□ 1
TRIM54-202ENST00000380075 LPCAT4Q643R3 524 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 TXNDC8Q6A555 127 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 CCDC149Q6ZUS6 474 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 HTR3DQ70Z44 454 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 SPATA19Q7Z5L4 167 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 DDIASQ8IXT1 998 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 TSPEARQ8WU66 669 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 LRGUKQ96M69 825 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 APOL5Q9BWW9 433 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 NUDT4Q9NZJ9 180 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 NDUFAF1Q9Y375 327 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 DHRS7Q9Y394 339 aa21.31■■□□□ 1
TRIM54-202ENST00000380075 E7ENX8 843 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 HTRA2O43464 458 aaPredicted RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 UROSP10746 265 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 IDO1P14902 403 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 UQCRBP14927 111 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 MRPS22P82650 360 aaKnown RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 MPPE1Q53F39 396 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 COQ5Q5HYK3 327 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 ATXN7L2Q5T6C5 722 aaPredicted RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 ANKRD54Q6NXT1 300 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 PRMT9Q6P2P2 845 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 OR56A4Q8NGH8 313 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 GRIN3AQ8TCU5 1115 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 SLC30A3Q99726 388 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 GALPQ9UBC7 116 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 PCTPQ9UKL6 214 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 PPP6CO00743 305 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms