RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CYP51A1Q16850 503 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 SLC36A3Q495N2 470 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 FUT11Q495W5 492 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 PYCR3Q53H96 274 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 C6orf136Q5SQH8 315 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 SAPCD2Q86UD0 394 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 TMEM199Q8N511 208 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 NKAPQ8N5F7 415 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 LPCAT1Q8NF37 534 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 NUDT8Q8WV74 236 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 DTNBP1Q96EV8 351 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 CDK15Q96Q40 435 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 ZIC5Q96T25 663 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 BPIFA1Q9NP55 256 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 RSL24D1Q9UHA3 163 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 EIF2B4Q9UI10 523 aaKnown RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 HEMK1Q9Y5R4 338 aaPredicted RBP10.83□□□□□ -0.68
BEST1-201ENST00000378043 ST14Q9Y5Y6 855 aa10.83□□□□□ -0.68
BEST1-201ENST00000378043 THSD7BQ9C0I4 1608 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 C2orf81A6NN90 581 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 TMCC1O94876 653 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 OR4F21O95013 312 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 BMP10O95393 424 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 CD160O95971 181 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 GPIP06744 558 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 ELNP15502 786 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 LPOP22079 712 aaPredicted RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 MC4RP32245 332 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 RFC2P35250 354 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 CDK9P50750 372 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 CDH4P55283 916 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 OXCT1P55809 520 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 ERVPABLB-1P60509 514 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 CTBSQ01459 385 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 SPATS1Q496A3 300 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 TIGD2Q4W5G0 525 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 NANOGP8Q6NSW7 305 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 RGMBQ6NW40 437 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 TMEM173Q86WV6 379 aaPredicted RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 CPNE9Q8IYJ1 553 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 BBS5Q8N3I7 341 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 PAPD5Q8NDF8 572 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 ISG20Q96AZ6 181 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 RPF2Q9H7B2 306 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 NANOGQ9H9S0 305 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 FNDC3AQ9Y2H6 1198 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 TMEM88BA6NKF7 163 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 SLC38A8A6NNN8 435 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 IQCF5A8MTL0 148 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 ANKRD66B4E2M5 251 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 EI24O14681 340 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 SNX2O60749 519 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 RASAL1O95294 804 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 MLYCDO95822 493 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 MT-ND1P03886 318 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 PYGLP06737 847 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 HRH2P25021 359 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 KPNA1P52294 538 aaPredicted RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 POLR2JP52435 117 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 ACLYP53396 1101 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 FCGRTP55899 365 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 ERVK-8P63133 956 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 FXNQ16595 210 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 KCTD21Q4G0X4 260 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 LETMD1Q6P1Q0 360 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 GPRIN3Q6ZVF9 776 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 TAS1R1Q7RTX1 841 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 DENND1CQ8IV53 801 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 CDYL2Q8N8U2 506 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 EZH1Q92800 747 aaPredicted RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 LINGO1Q96FE5 620 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 ACTL8Q9H568 366 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 AGO1Q9UL18 857 aaKnown RBP10.82□□□□□ -0.68
BEST1-201ENST00000378043 RAI2Q9Y5P3 530 aa10.82□□□□□ -0.68
BEST1-201ENST00000378043 RNF103-CHMP3A0A140T963 221 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 CCDC154A6NI56 674 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 NT5C1B-RDH14C9J2C7 533 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 CBX4O00257 560 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ADAM12O43184 909 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 VPS26AO75436 327 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 CD9P21926 228 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ATP5C1P36542 298 aaKnown RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 SLC11A1P49279 550 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 IL2P60568 153 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TRAF2Q12933 501 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TGFBIQ15582 683 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 RBBP7Q16576 425 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 C18orf21Q32NC0 220 aaPredicted RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 PDCD4Q53EL6 469 aaKnown RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 TXNDC11Q6PKC3 985 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 GPSM1Q86YR5 675 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ZNF786Q8N393 782 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TTC30BQ8N4P2 665 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 PCSK9Q8NBP7 692 aaKnown RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 OR56A4Q8NGH8 313 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 EID2BQ96D98 161 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms