RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TRMT13Q9NUP7 481 aaKnown RBP14.42□□□□□ -0.1
MSH5-201ENST00000375703 RIC8BQ9NVN3 520 aa14.42□□□□□ -0.1
MSH5-201ENST00000375703 SMPD3Q9NY59 655 aaPredicted RBP14.42□□□□□ -0.1
MSH5-201ENST00000375703 TRMT6Q9UJA5 497 aaKnown RBP14.42□□□□□ -0.1
MSH5-201ENST00000375703 TRIM64A6NGJ6 449 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 INSIG1O15503 277 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 OR1I1O60431 355 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 SNAP91O60641 907 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 PFDN1O60925 122 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 OR4F21O95013 312 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 C1RP00736 705 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 IL12AP29459 219 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 RPS9P46781 194 aaKnown RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 HUNKP57058 714 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 IL2P60568 153 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 C6orf136Q5SQH8 315 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 MFSD14CQ5VZR4 134 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 GPRIN3Q6ZVF9 776 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 PROSER1Q86XN7 944 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 OFCC1Q8IZS5 231 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 CDYL2Q8N8U2 506 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 SEPT5Q99719 369 aaPredicted RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 NPLQ9BXD5 320 aaPredicted RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 INTS7Q9NVH2 962 aaKnown RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 ZIM2Q9NZV7 527 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 UBA2Q9UBT2 640 aaPredicted RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 USP22Q9UPT9 525 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 VPS9D1Q9Y2B5 631 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 ARIH1Q9Y4X5 557 aaPredicted RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 A0A0J9YVX5 310 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 FAM234BA2RU67 622 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 TLR5O60602 858 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 NIPSNAP2O75323 286 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 MT-ND1P03886 318 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 LPOP22079 712 aaPredicted RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 HTR1EP28566 365 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 HK3P52790 923 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 EMX2Q04743 252 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 CYBRD1Q53TN4 286 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 HABP4Q5JVS0 413 aaKnown RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 FAM171A1Q5VUB5 890 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 PSAPL1Q6NUJ1 521 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 SLC24A5Q71RS6 500 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 PATL1Q86TB9 770 aaKnown RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 PIANPQ8IYJ0 282 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 DCBLD1Q8N8Z6 715 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 PROKR1Q8TCW9 393 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 C12orf43Q96C57 262 aaKnown RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 VPS50Q96JG6 964 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 B3GALT6Q96L58 329 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 RNF145Q96MT1 663 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 FNDC3AQ9Y2H6 1198 aaKnown RBP14.41□□□□□ -0.1
MSH5-201ENST00000375703 V9GYQ6 96 aa14.41□□□□□ -0.1
MSH5-201ENST00000375703 SYN3O14994 580 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 PFDN6O15212 129 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 TSPAN12O95859 305 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 NPPAP01160 153 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 PRLP01236 227 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 CTGFP29279 349 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 SLC6A4P31645 630 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 GALK1P51570 392 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 ATP6AP1LQ52LC2 224 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 GPR180Q86V85 440 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 HID1Q8IV36 788 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 LINGO1Q96FE5 620 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 PLEKHG4BQ96PX9 1271 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 CHID1Q9BWS9 393 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 RPF2Q9H7B2 306 aaKnown RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 CXorf21Q9HAI6 301 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 SCUBE2Q9NQ36 999 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 EIF2B4Q9UI10 523 aaKnown RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 ZFP37Q9Y6Q3 630 aaPredicted RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 ZNF701M0R085 212 aaPredicted RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 E2F3O00716 465 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 SNAP29O95721 258 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 MC4RP32245 332 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 ARL1P40616 181 aaPredicted RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 STT3AP46977 705 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 TTPAP49638 278 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 KPNA1P52294 538 aaPredicted RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 OXCT1P55809 520 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 PRKG2Q13237 762 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 ZRANB3Q5FWF4 1079 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 FAM26DQ5JW98 314 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 GLYATQ6IB77 296 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 SLC2A7Q6PXP3 512 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 Q6ZSR9 355 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 RALGPS2Q86X27 583 aaPredicted RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 LPCAT1Q8NF37 534 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 TRIB2Q92519 343 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 CDK15Q96Q40 435 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 BDH2Q9BUT1 245 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 LRRC3Q9BY71 257 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 SEZ6LQ9BYH1 1024 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 BPIFA1Q9NP55 256 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 SARS2Q9NP81 518 aaKnown RBP14.4□□□□□ -0.1
MSH5-201ENST00000375703 FKBPLQ9UIM3 349 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 CDC14AQ9UNH5 594 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms