RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 OCMP0CE72 109 aaPredicted RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 HLA-EP13747 358 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 CACNA2D1P54289 1103 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 SIX1Q15475 284 aaPredicted RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 RALGPS2Q86X27 583 aaPredicted RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 PNPT1Q8TCS8 783 aaKnown RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 HERVK_113Q902F9 699 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 CDK15Q96Q40 435 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 OR2AG1Q9H205 316 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 KLHL28Q9NXS3 571 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 PSME2Q9UL46 239 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ANKRD36CQ5JPF3 1778 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 EFNA1P20827 205 aaPredicted RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TIE1P35590 1138 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 CHIT1Q13231 466 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 SPIDRQ14159 915 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ZCCHC8Q6NZY4 707 aaKnown RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 EID3Q8N140 333 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TRPV1Q8NER1 839 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ZNF184Q99676 751 aaPredicted RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TNRC6CQ9HCJ0 1690 aaKnown RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 LEFTY2O00292 366 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 DYRK3O43781 588 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 OGNP20774 298 aaKnown RBP17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 AQP1P29972 269 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ZNF276Q8N554 614 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 SYT11Q9BT88 431 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ATAD3AQ9NVI7 634 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TMEM248Q9NWD8 314 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ADPRHL2Q9NX46 363 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 FETUBQ9UGM5 382 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TMCO1Q9UM00 188 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 ANKRD12Q6UB98 2062 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TRIM38O00635 465 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 PIP5K1BO14986 540 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 OAZ2O95190 189 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 FSHRP23945 695 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 PIK3R6Q5UE93 754 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 GDPD4Q6W3E5 623 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 TMEM26Q6ZUK4 368 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 FAM156AQ8NDB6 213 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 QRFPRQ96P65 431 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 RAD9AQ99638 391 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 LRTM1Q9HBL6 345 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 LRCH1Q9Y2L9 728 aa17.8■□□□□ 0.44
PTPDC1-202ENST00000375360 H3BN98 237 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 PRAMEF11O60813 436 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 TGDSO95455 350 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 ITGBL1O95965 494 aaPredicted RBP17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 STK19P49842 368 aaPredicted RBP17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 PNPLA1Q8N8W4 532 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 ZDHHC4Q9NPG8 344 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 PITPNM1O00562 1244 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 GMPRP36959 345 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 DHDDSQ86SQ9 333 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 SKA1Q96BD8 255 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 NACC2Q96BF6 587 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 RIBC2Q9H4K1 309 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 KRT84Q9NSB2 600 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 SLC27A6Q9Y2P4 619 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 IDH3AP50213 366 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 RPS7P62081 194 aaKnown RBP17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 ADCK1Q86TW2 530 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 CYP4Z1Q86W10 505 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 RIOK2Q9BVS4 552 aaKnown RBP17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 TMEM233B4DJY2 109 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 DCLK1O15075 740 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 MT-ND1P03886 318 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 HSMCR30P0CW71 290 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 IRF5Q13568 498 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 MPP2Q14168 576 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 ZDHHC20Q5W0Z9 365 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 SPESP1Q6UW49 350 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 NET1Q7Z628 596 aaPredicted RBP17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 DSELQ8IZU8 1212 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 HDDC3Q8N4P3 179 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 DHRSXQ8N5I4 330 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 ARFGAP1Q8N6T3 406 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 GAS2L1Q99501 681 aaPredicted RBP17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 NLNQ9BYT8 704 aa17.79■□□□□ 0.44
PTPDC1-202ENST00000375360 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 GTF2H2Q13888 395 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 GTF2H2CQ6P1K8 395 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 PAOXQ6QHF9 649 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 MRPL10Q7Z7H8 261 aaKnown RBP17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 WDR48Q8TAF3 677 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 KLHL3Q9UH77 587 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 RASGRP1O95267 797 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 PFKMP08237 780 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 ADH5P11766 374 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 SSR2P43308 183 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 SNX20Q7Z614 316 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 PIGWQ7Z7B1 504 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 ANKRD46Q86W74 232 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 BPIFB1Q8TDL5 484 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 ELAC1Q9H777 363 aaKnown RBP17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 PDP2Q9P2J9 529 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 GALPQ9UBC7 116 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 GULP1Q9UBP9 304 aa17.78■□□□□ 0.44
PTPDC1-202ENST00000375360 CLDN9O95484 217 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms