RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GPSM1Q86YR5 675 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ETFBKMTQ8IXQ9 262 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DTX3LQ8TDB6 740 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 HCAR2Q8TDS4 363 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ZNF483Q8TF39 744 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CYB5D2Q8WUJ1 264 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PBXIP1Q96AQ6 731 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ULK4Q96C45 1275 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SARS2Q9NP81 518 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LATS2Q9NRM7 1088 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ZDHHC3Q9NYG2 299 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PRSS21Q9Y6M0 314 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TCF20Q9UGU0 1960 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DOCK8Q8NF50 2099 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 IGLV3-16A0A075B6K0 115 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RGSL1A5PLK6 1076 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 A8MX80 341 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TTC34A8MYJ7 566 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SKAP2O75563 359 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 THRAP10827 490 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 GM2AP17900 193 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NFKBIAP25963 317 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NSG1P42857 185 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NRIP1P48552 1158 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SPINT3P49223 89 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RGS4P49798 205 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 HK3P52790 923 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CLCQ05315 142 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SHHQ15465 462 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TCEAL5Q5H9L2 206 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 KANK2Q63ZY3 851 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SCUBE1Q8IWY4 988 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RP9Q8TA86 221 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 BPIFB1Q8TDL5 484 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ASB16Q96NS5 453 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CATSPER2Q96P56 530 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LENG8Q96PV6 779 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ZBTB26Q9HCK0 441 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DZANK1Q9NVP4 752 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 OBP2AQ9NY56 170 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 KLHL42Q9P2K6 505 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NFKBIL1Q9UBC1 381 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DKK3Q9UBP4 350 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LRRK1Q38SD2 2015 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LRRC14BA6NHZ5 514 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MEI4A8MW99 385 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 AZIN1O14977 448 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NFATC1O95644 943 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LMNAP02545 664 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 VIPR1P32241 457 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CDH13P55290 713 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DCDC1P59894 354 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 FAM78AQ5JUQ0 283 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TMEM198Q66K66 360 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CYHR1Q6ZMK1 362 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ULK2Q8IYT8 1036 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ENDOVQ8N8Q3 282 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 VN1R2Q8NFZ6 395 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CFAP61Q8NHU2 1237 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LKAAEAR1Q8TD35 194 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SORCS1Q8WY21 1168 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SMARCD2Q92925 531 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CDCA3Q99618 268 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RNPEPL1Q9HAU8 725 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MID1IP1Q9NPA3 183 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PKD2L2Q9NZM6 624 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 IL36AQ9UHA7 158 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PCTPQ9UKL6 214 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 FIS1Q9Y3D6 152 aa17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 COPG1Q9Y678 874 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UPK3BL1B0FP48 263 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UPK3BL2E5RIL1 263 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TULP3O75386 442 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LEFTY1O75610 366 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SLC25A14O95258 325 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 EZRP15311 586 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TSPAN8P19075 237 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DGKAP23743 735 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 FSHRP23945 695 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 VIPR2P41587 438 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ARHGEF7Q14155 803 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TGFBIQ15582 683 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 GPRC6AQ5T6X5 926 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TRIM68Q6AZZ1 485 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SBSNQ6UWP8 590 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NET1Q7Z628 596 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 C12orf40Q86WS4 652 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MYLIPQ8WY64 445 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 C19orf60Q96EN9 201 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NSUN5Q96P11 429 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TRPV4Q9HBA0 871 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SMOXQ9NWM0 555 aa17.78■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SNX2O60749 519 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MLYCDO95822 493 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ITGAXP20702 1163 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SLC25A3Q00325 362 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SEMG2Q02383 582 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CDC16Q13042 620 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SQLEQ14534 574 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms