RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PAK5Q9P286 719 aa4.88□□□□□ -1.63
USP48-202ENST00000374730 TBK1Q9UHD2 729 aa4.88□□□□□ -1.63
USP48-202ENST00000374730 PCSK1NQ9UHG2 260 aa4.88□□□□□ -1.63
USP48-202ENST00000374730 UBQLN1Q9UMX0 589 aaKnown RBP4.88□□□□□ -1.63
USP48-202ENST00000374730 ARL2BPQ9Y2Y0 163 aa4.88□□□□□ -1.63
USP48-202ENST00000374730 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.88□□□□□ -1.63
USP48-202ENST00000374730 COL4A4P53420 1690 aaPredicted RBP4.88□□□□□ -1.63
USP48-202ENST00000374730 CCL15-CCL14A0A0B4J2E2 113 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 BCLAF3A2AJT9 711 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 MBLAC1A4D2B0 266 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 SLC15A5A6NIM6 579 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 VWC2LB2RUY7 222 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 BTBD19C9JJ37 291 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 POC1B-GALNT4F8VUJ3 575 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 APOL1O14791 398 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TM9SF1O15321 606 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PAPSS1O43252 624 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 CSDE1O75534 798 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 TOMM70O94826 608 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CD4P01730 458 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 GSTA2P09210 222 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 FAM163BP0C2L3 166 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PF4V1P10720 104 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ALADP13716 330 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 DARSP14868 501 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 KCNE1P15382 129 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PDGFRAP16234 1089 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ZFXP17010 805 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 TPSB2P20231 275 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ITGALP20701 1170 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 IL4RP24394 825 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ITPKBP27987 946 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 HOXA11P31270 313 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 FOXN2P32314 431 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PNPLA4P41247 253 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 BCAT1P54687 386 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 NCALDP61601 193 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 BNIP1Q12981 228 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 KRT81Q14533 505 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TAF5Q15542 800 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TPSAB1Q15661 275 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PKN2Q16513 984 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 DPYSL2Q16555 572 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PDK4Q16654 411 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CCL15Q16663 113 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 C15orf59Q2T9L4 293 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 CCDC14Q49A88 953 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 XKR4Q5GH76 650 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 FNBP1LQ5T0N5 605 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TSTD2Q5T7W7 516 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 C9orf57Q5W0N0 161 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ICE2Q659A1 982 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CGB2Q6NT52 195 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CYB5D1Q6P9G0 228 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ALKAL1Q6UXT8 129 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 SLC26A9Q7LBE3 791 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CATSPER4Q7RTX7 472 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 GPR142Q7Z601 462 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CDKL3Q8IVW4 592 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 CRYBG2Q8N1P7 616 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 FAM109AQ8N4B1 249 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PQLC3Q8N755 202 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PLD5Q8N7P1 536 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 FAM71DQ8N9W8 422 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 FBXO36Q8NEA4 188 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 UBA3Q8TBC4 463 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ZNF398Q8TD17 642 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 MAGEC3Q8TD91 643 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 FAM172AQ8WUF8 416 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 DCAKDQ8WVC6 231 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 BRI3BPQ8WY22 251 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 HSPH1Q92598 858 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 CENPIQ92674 756 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 LRRC39Q96DD0 335 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PIWIL1Q96J94 861 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 HSFY1Q96LI6 401 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ZNF560Q96MR9 790 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 ZMAT2Q96NC0 199 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 CYTH2Q99418 400 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 PAFAH2Q99487 392 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 WDR83Q9BRX9 315 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 CALN1Q9BXU9 219 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 MAK16Q9BXY0 300 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 MRPL46Q9H2W6 279 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 ABCF3Q9NUQ8 709 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 EHD3Q9NZN3 535 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 HESX1Q9UBX0 185 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TUBGCP4Q9UGJ1 667 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 XPO7Q9UIA9 1087 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 NME7Q9Y5B8 376 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 SNX9Q9Y5X1 595 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 TEX264Q9Y6I9 313 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 NRCAMQ92823 1304 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 FNDC1Q4ZHG4 1894 aaPredicted RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 PTPRDP23468 1912 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms