RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 GAS8O95995 478 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PENKP01210 267 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 JCHAINP01591 159 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 NTRK1P04629 796 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CYP17A1P05093 508 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 LAMP2P13473 410 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ARSAP15289 507 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CAPN3P20807 821 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CCNCP24863 283 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 HOXD9P28356 352 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 TNFRSF8P28908 595 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SERPINB6P35237 376 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ADCY8P40145 1251 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 AFF3P51826 1226 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 MAP2K6P52564 334 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ITGA8P53708 1063 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 LGALS4P56470 323 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 YBEYP58557 167 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 RPL11P62913 178 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 MPP1Q00013 466 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 DSC2Q02487 901 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 GAD2Q05329 585 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 GPS1Q13098 491 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 IHHQ14623 411 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 P3H1Q32P28 736 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 MPPE1Q53F39 396 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ANKRD20A2Q5SQ80 823 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 LY6G5CQ5SRR4 150 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ANKRD20A1Q5TYW2 823 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ANKRD20A3Q5VUR7 823 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ANKRD22Q5VYY1 191 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 MBNL2Q5VZF2 373 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 TRIM68Q6AZZ1 485 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CES5AQ6NT32 575 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PARM1Q6UWI2 310 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SETD3Q86TU7 594 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 IFT20Q8IY31 132 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CCDC13Q8IYE1 715 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ZNF567Q8N184 647 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SMRP1Q8NCR6 262 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 NAXEQ8NCW5 288 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 DDI1Q8WTU0 396 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CPT1BQ92523 772 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ANKRD7Q92527 254 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 MAML1Q92585 1016 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ART4Q93070 314 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ARL8AQ96BM9 186 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 HDAC11Q96DB2 347 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 APIPQ96GX9 242 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ZFYVE19Q96K21 471 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PPM1MQ96MI6 270 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SPATA13Q96N96 652 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 GUCD1Q96NT3 240 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 IL12RB2Q99665 862 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 GORASP1Q9BQQ3 440 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ACE2Q9BYF1 805 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 BRD8Q9H0E9 1235 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 MAGEH1Q9H213 219 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 RETREG1Q9H6L5 497 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SEPT10Q9P0V9 454 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PDP2Q9P2J9 529 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 TBC1D14Q9P2M4 693 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ASIC3Q9UHC3 531 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CD207Q9UJ71 328 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 INTS6Q9UL03 887 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 NFU1Q9UMS0 254 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CRYL1Q9Y2S2 319 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 UTP11Q9Y3A2 253 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 USP15Q9Y4E8 981 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 MYO18AQ92614 2054 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 NUP210Q8TEM1 1887 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 UNC80Q8N2C7 3258 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 POM121BA6NF01 834 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 OTOL1A6NHN0 477 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 H0Y626 953 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 DNALI1O14645 258 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 TRIM24O15164 1050 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 KDELR3O43731 214 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SNAP91O60641 907 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ZMPSTE24O75844 475 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 RHOCP08134 193 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CELA3BP08861 270 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CISD3P0C7P0 127 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 GLI4P10075 376 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CCNB1P14635 433 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 CD70P32970 193 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 MTHFRP42898 656 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PLTPP55058 493 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 RAB1AP62820 205 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 IFI35P80217 286 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 ZNF33AQ06730 810 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SLC10A7Q0GE19 358 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 LMAN2Q12907 356 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PARP15Q460N3 678 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 TEX44Q53QW1 395 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 MPP7Q5T2T1 576 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 RNASEH2BQ5TBB1 312 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 FAXCQ5TGI0 409 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ICE2Q659A1 982 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FBXO38Q6PIJ6 1188 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms