RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 HAPLN3Q96S86 360 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 CRISPLD1Q9H336 500 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 CLK4Q9HAZ1 481 aaKnown RBP19.5■□□□□ 0.71
LMO4-202ENST00000370544 COLEC10Q9Y6Z7 277 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 PAX7P23759 505 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 ACLYP53396 1101 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 ZNF460Q14592 562 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 REP15Q6BDI9 236 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 SAPCD2Q86UD0 394 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 RALGPS2Q86X27 583 aaPredicted RBP19.5■□□□□ 0.71
LMO4-202ENST00000370544 DENND6AQ8IWF6 608 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 NOL6Q9H6R4 1146 aaKnown RBP19.5■□□□□ 0.71
LMO4-202ENST00000370544 CERS4Q9HA82 394 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 FZD9O00144 591 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 SLC7A4O43246 635 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 VIPP01282 170 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 OGNP20774 298 aaKnown RBP19.5■□□□□ 0.71
LMO4-202ENST00000370544 ERVK-21P61565 698 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 CYP4F8P98187 520 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 TAB1Q15750 504 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 DCBLD1Q8N8Z6 715 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 FAM13CQ8NE31 585 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 PPIEQ9UNP9 301 aaKnown RBP19.5■□□□□ 0.71
LMO4-202ENST00000370544 GRIN2DO15399 1336 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 TM7SF2O76062 418 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 DGKGP49619 791 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 NEK5Q6P3R8 708 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 C7orf61Q8IZ16 206 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 OR2T34Q8NGX1 318 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 OR2T3Q8NH03 318 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 RAD51AP1Q96B01 352 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 CCNB1IP1Q9NPC3 277 aa19.5■□□□□ 0.71
LMO4-202ENST00000370544 CCDC177Q9NQR7 707 aaPredicted RBP19.5■□□□□ 0.71
LMO4-202ENST00000370544 H0YC42 278 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ESR1P03372 595 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 AQP1P29972 269 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 GSTT1P30711 240 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 PTGER3P43115 390 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ATXN7L2Q5T6C5 722 aaPredicted RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 SULT1C3Q6IMI6 304 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 MED27Q6P2C8 311 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 DLK2Q6UY11 383 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 PTCHD4Q6ZW05 846 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 KREMEN2Q8NCW0 462 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ADAMTS15Q8TE58 950 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 TLCD1Q96CP7 247 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 RACGAP1Q9H0H5 632 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 EQTNQ9NQ60 294 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ARHGEF3Q9NR81 526 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 POLR3BQ9NW08 1133 aaPredicted RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 IRAK2O43187 625 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ERN1O75460 977 aaKnown RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 GAD2Q05329 585 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 C2orf80Q0P641 193 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 NDUFAF6Q330K2 333 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 RFTN2Q52LD8 501 aaPredicted RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 SNAP47Q5SQN1 464 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ZNF781Q8N8C0 355 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 NTAN1Q96AB6 310 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 CACNG4Q9UBN1 327 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ANXA4P09525 319 aaPredicted RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 ITGADQ13349 1161 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 DCTN2Q13561 401 aaKnown RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 KRT77Q7Z794 578 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 PGAM4Q8N0Y7 254 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 CNTD1Q8N815 330 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 PHC3Q8NDX5 983 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 VANGL1Q8TAA9 524 aaPredicted RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 RPL10LQ96L21 214 aaKnown RBP19.49■□□□□ 0.71
LMO4-202ENST00000370544 MUC13Q9H3R2 512 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 PHLPP1O60346 1717 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 ABCC6O95255 1503 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 CAPN1P07384 714 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 FECHP22830 423 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 SYPL2Q5VXT5 272 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 LPCAT4Q643R3 524 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 CLPTM1LQ96KA5 538 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 KLHL32Q96NJ5 620 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 U3KQV3 271 aa19.49■□□□□ 0.71
LMO4-202ENST00000370544 DUOX1Q9NRD9 1551 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 GULP1Q9UBP9 304 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 SLC45A1Q9Y2W3 748 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 H3BNH8 94 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 MTHFRP42898 656 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 SLC1A2P43004 574 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 ADARP55265 1226 aaKnown RBP19.48■□□□□ 0.71
LMO4-202ENST00000370544 ASTE1Q2TB18 679 aaPredicted RBP19.48■□□□□ 0.71
LMO4-202ENST00000370544 KLHL12Q53G59 568 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 KIAA0930Q6ICG6 404 aaPredicted RBP19.48■□□□□ 0.71
LMO4-202ENST00000370544 SCLYQ96I15 445 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 PCDHGB3Q9Y5G1 929 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 MFN2O95140 757 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 DBTP11182 482 aaKnown RBP19.48■□□□□ 0.71
LMO4-202ENST00000370544 BNIP1Q12981 228 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 CPNE9Q8IYJ1 553 aa19.48■□□□□ 0.71
LMO4-202ENST00000370544 RPRD1BQ9NQG5 326 aaKnown RBP19.48■□□□□ 0.71
LMO4-202ENST00000370544 INTS10Q9NVR2 710 aaKnown RBP19.48■□□□□ 0.71
LMO4-202ENST00000370544 FFAR2O15552 330 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms