RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PAQR3Q6TCH7 311 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CYP2R1Q6VVX0 501 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RINLQ6ZS11 566 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TPRG1Q6ZUI0 275 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CPSF7Q8N684 471 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 BEND7Q8N7W2 519 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ITFG1Q8TB96 612 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RPL10LQ96L21 214 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 NR1H4Q96RI1 486 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 EBF4Q9BQW3 602 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 C1orf21Q9H246 121 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 IL23AQ9NPF7 189 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SCN3BQ9NY72 215 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PSMD13Q9UNM6 376 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 INVSQ9Y283 1065 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 A0A0D9SEW6 157 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DRGXA6NNA5 263 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ITM2AO43736 263 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CDK14O94921 469 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PGM3O95394 542 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CLDN9O95484 217 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CHRNGP07510 517 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 HNRNPA1P09651 372 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FAM58BPP0C7Q3 252 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FGF3P11487 239 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CD68P34810 354 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GPC1P35052 558 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CCT8P50990 548 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PNLIPRP1P54315 467 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 HPCAP84074 193 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 LRRC74AQ0VAA2 488 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 EPS8Q12929 822 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GTF2H2Q13888 395 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CPSF6Q16630 551 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 XKR6Q5GH73 641 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PDE12Q6L8Q7 609 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GTF2H2CQ6P1K8 395 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 C7orf61Q8IZ16 206 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CHPFQ8IZ52 775 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CELF5Q8N6W0 485 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SIDT2Q8NBJ9 832 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GSTCDQ8NEC7 633 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC22A17Q8WUG5 538 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FIG4Q92562 907 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 KCNJ9Q92806 393 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 KIAA1191Q96A73 305 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF514Q96K75 400 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 KLHL32Q96NJ5 620 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FEM1AQ9BSK4 669 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CXCL16Q9H2A7 254 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CAAP1Q9H8G2 361 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 MAGEE1Q9HCI5 957 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 C8orf4Q9NR00 106 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZDHHC3Q9NYG2 299 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PRKAG3Q9UGI9 489 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CORO2BQ9UQ03 480 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 COMMD3-BMI1R4GMX3 469 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZCWPW2A0A1B0GU75 182 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ANKDD1BA6NHY2 528 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 F8W810 466 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 H3BM21 787 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CITO14578 2027 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TNFAIP8O95379 198 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 DHRS4L1P0CG22 281 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CBSLP0DN79 551 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 COX7A2P14406 83 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CSF2RAP15509 400 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PPIBP23284 216 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CBSP35520 551 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC7A2P52569 658 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 VAC14Q08AM6 782 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ABRQ12979 859 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC14A2Q15849 920 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 AP5B1Q2VPB7 878 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PLEKHG6Q3KR16 790 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TNFAIP8L3Q5GJ75 292 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 RBM20Q5T481 1227 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 KIAA0319Q5VV43 1072 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CAPN13Q6MZZ7 669 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 DOK6Q6PKX4 331 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 EPGNQ6UW88 154 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LYSMD3Q7Z3D4 306 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 GPR180Q86V85 440 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PROSER1Q86XN7 944 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF641Q96N77 438 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 FAM210AQ96ND0 272 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 NOL11Q9H8H0 719 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 S100A14Q9HCY8 104 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D23Q9NUY8 699 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LIMD1Q9UGP4 676 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TDRKHQ9Y2W6 561 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 MYO18AQ92614 2054 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LEFTY2O00292 366 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 MATN2O00339 956 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 STX16O14662 325 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms