RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 ZDHHC3Q9NYG2 299 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 SIRPGQ9P1W8 387 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 TLK1Q9UKI8 766 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 IKZF3Q9UKT9 509 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 COQ6Q9Y2Z9 468 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 ACOT9Q9Y305 439 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 A0A087X1B8 175 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 A0A1W2PP55 124 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 UBA6A0AVT1 1052 aaPredicted RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 IQCF5A8MTL0 148 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 H3BMM5 538 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 K7ESM1 405 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 MAN2B1O00754 1011 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 PRMT5O14744 637 aaPredicted RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 WNT9AO14904 365 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 RNASEH1O60930 286 aaKnown RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 NIPSNAP2O75323 286 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TSPAN12O95859 305 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 ESR1P03372 595 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 BPGMP07738 259 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 ELFN1P0C7U0 828 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 HOXB2P14652 356 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 SLC26A3P40879 764 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 KCNC1P48547 511 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 CLCN7P51798 805 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 IL9RQ01113 521 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 DPTQ07507 201 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 GAS6Q14393 721 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 STARD3Q14849 445 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 ACOX1Q15067 660 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 PDK4Q16654 411 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 HSF5Q4G112 596 aaPredicted RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 FBXO43Q4G163 708 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 HHATQ5VTY9 493 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 SDE2Q6IQ49 451 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 PAQR3Q6TCH7 311 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 MACC1Q6ZN28 852 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 Q6ZS52 159 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 RAPH1Q70E73 1250 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TRMT11Q7Z4G4 463 aaKnown RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 LCA5Q86VQ0 697 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 NLRP8Q86W28 1048 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 CACUL1Q86Y37 369 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TMPRSS6Q8IU80 811 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 RBFAQ8N0V3 343 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 CLDN19Q8N6F1 224 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 RPLP0P6Q8NHW5 317 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 CD200R1Q8TD46 325 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 ZNF75CPQ92670 426 aaPredicted RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 KCNJ9Q92806 393 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.39□□□□□ -0.91
VTA1-201ENST00000367621 ULK4Q96C45 1275 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TSPAN17Q96FV3 270 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 GPR21Q99679 349 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 MECRQ9BV79 373 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 SPATA16Q9BXB7 569 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 UNKQ9C0B0 810 aaKnown RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 EPN3Q9H201 632 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 FBRSQ9HAH7 460 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 C2orf42Q9NWW7 574 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 CRLS1Q9UJA2 301 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 MMP17Q9ULZ9 603 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 ZFR2Q9UPR6 939 aaKnown RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 RUVBL2Q9Y230 463 aaKnown RBP9.39□□□□□ -0.91
VTA1-201ENST00000367621 FAM50BQ9Y247 325 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TICRRQ7Z2Z1 1910 aa9.39□□□□□ -0.91
VTA1-201ENST00000367621 TCF20Q9UGU0 1960 aaKnown RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 WDR91A4D1P6 747 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 GMNCA6NCL1 334 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 IGLON5A6NGN9 336 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 CHURC1-FNTBB4DL54 471 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 TCP11X1B4DZS4 312 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 BIRC5O15392 142 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 TSPAN6O43657 245 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 CCDC166P0CW27 439 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 CD1DP15813 335 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 ZNF37AP17032 561 aaPredicted RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 ZNF7P17097 686 aaPredicted RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 BGNP21810 368 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 TARSP26639 723 aaKnown RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 STARD6P59095 220 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 IRX4P78413 519 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 PRKCQQ04759 706 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 ITGA9Q13797 1035 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 FGL2Q14314 439 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 PCLAFQ15004 111 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 SUZ12Q15022 739 aaKnown RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 AGERQ15109 404 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 CCDC153Q494R4 210 aa9.38□□□□□ -0.91
VTA1-201ENST00000367621 TAF1BQ53T94 588 aaPredicted RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 ZNF648Q5T619 568 aaPredicted RBP9.38□□□□□ -0.91
VTA1-201ENST00000367621 CGB2Q6NT52 195 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms