RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZDHHC24Q6UX98 284 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 RNF44Q7L0R7 432 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 ZNF571Q7Z3V5 609 aaPredicted RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 TMPRSS9Q7Z410 1059 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 CLNKQ7Z7G1 428 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 SDR16C5Q8N3Y7 309 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 TC2NQ8N9U0 490 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 IRGQQ8WZA9 623 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 SYN2Q92777 582 aaPredicted RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 DVL3Q92997 716 aaPredicted RBP7.98□□□□□ -1.13
YBX3-204ENST00000366290 CD101Q93033 1021 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 WBP2Q969T9 261 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 HSFY1Q96LI6 401 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 SELENOOQ9BVL4 669 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 LHX5Q9H2C1 402 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 AKIP1Q9NQ31 210 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 CNGB3Q9NQW8 809 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 ZNF212Q9UDV6 495 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 CDC23Q9UJX2 597 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 TBC1D30Q9Y2I9 924 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 EML5Q05BV3 1969 aa7.98□□□□□ -1.13
YBX3-204ENST00000366290 PRAMEF33A0A0G2JMD5 474 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 A0A1W2PS29 197 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 MARCH11A6NNE9 402 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 E7ENX8 843 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 F5H423 210 aaPredicted RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 K7EQS6 105 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 IFRD1O00458 451 aaPredicted RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 PRAMEF10O60809 474 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 EGFP01133 1207 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 UNGP13051 313 aaPredicted RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 RGS7P49802 495 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 ANXA11P50995 505 aaKnown RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 ZNF134P52741 427 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 YWHAGP61981 247 aaKnown RBP eCLIP7.97□□□□□ -1.13
YBX3-204ENST00000366290 COG7P83436 770 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 TAP2Q03519 686 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 PDCLQ13371 301 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 SPATS1Q496A3 300 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 PTPN20Q4JDL3 420 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 USP39Q53GS9 565 aaKnown RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 C10orf120Q5SQS8 335 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 LY6G5CQ5SRR4 150 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 SFMBT2Q5VUG0 894 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 BEND5Q7L4P6 421 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 SYT13Q7L8C5 426 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 ZNF677Q86XU0 584 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 BBS7Q8IWZ6 715 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 FAM217AQ8IXS0 508 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 C1orf131Q8NDD1 294 aaKnown RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 IPCEF1Q8WWN9 437 aaPredicted RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 ATRIPQ8WXE1 791 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 NDRG1Q92597 394 aaKnown RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 RUBCNQ92622 972 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 EXTL1Q92935 676 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 RNF31Q96EP0 1072 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 CPXM1Q96SM3 734 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 AGPAT1Q99943 283 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 ULBP1Q9BZM6 244 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 NACA2Q9H009 215 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 HAUS4Q9H6D7 363 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 LRRC4Q9HBW1 653 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 SPHK2Q9NRA0 654 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 OLA1Q9NTK5 396 aaKnown RBP7.97□□□□□ -1.13
YBX3-204ENST00000366290 ABHD10Q9NUJ1 306 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 PARPBPQ9NWS1 579 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 C2orf42Q9NWW7 574 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 MID2Q9UJV3 735 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 STOML2Q9UJZ1 356 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 NENFQ9UMX5 172 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 SHOC2Q9UQ13 582 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 ZNF510Q9Y2H8 683 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 ACACBO00763 2458 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 GON4LQ3T8J9 2241 aa7.97□□□□□ -1.13
YBX3-204ENST00000366290 FAM170AA1A519 330 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 YJEFN3A6XGL0 299 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 AKR1B15C9JRZ8 316 aaPredicted RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 E7ENQ6 273 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 PAPSS1O43252 624 aaPredicted RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 MED7O43513 233 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 CACNG3O60359 315 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 KLKB1P03952 638 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 ADRB1P08588 477 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 TNFRSF4P43489 277 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 MAPK10P53779 464 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 LOXL3P58215 753 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 DAOAP59103 153 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 MRPS21P82921 87 aaKnown RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 GAD2Q05329 585 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 KLHL30Q0D2K2 578 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 ADIGQ0VDE8 80 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 PTP4A2Q12974 167 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 PUM1Q14671 1186 aaKnown RBP eCLIP7.96□□□□□ -1.14
YBX3-204ENST00000366290 CDSNQ15517 529 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 ASTE1Q2TB18 679 aaPredicted RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 PREPLQ4J6C6 727 aaPredicted RBP7.96□□□□□ -1.14
YBX3-204ENST00000366290 PLA1AQ53H76 456 aa7.96□□□□□ -1.14
YBX3-204ENST00000366290 SPDYAQ5MJ70 313 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms