RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HACD3Q9P035 362 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AKAP7Q9P0M2 348 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KLHL8Q9P2G9 620 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CPNE7Q9UBL6 633 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SDK2Q58EX2 2172 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BOD1L1Q8NFC6 3051 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LILRA5A6NI73 299 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 EIF4E1BA6NMX2 242 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 B4E171 279 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DUX1O43812 170 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CDK14O94921 469 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC4A1P02730 911 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC2A4P14672 509 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BRAFP15056 766 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF7P17097 686 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HLA-DPA1P20036 260 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ADRA1AP35348 466 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC19A1P41440 591 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TSPAN7P41732 249 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OTUD4Q01804 1114 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TMEM115Q12893 351 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 NFATC2Q13469 925 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZDHHC20Q5W0Z9 365 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ABRAXAS1Q6UWZ7 409 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 WASH2PQ6VEQ5 465 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LRRTM4Q86VH4 590 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KLHDC8BQ8IXV7 354 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF843Q8N446 348 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC25A41Q8N5S1 370 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ACTL9Q8TC94 416 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DDA1Q9BW61 102 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 WASH6PQ9NQA3 447 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OCIAD1Q9NX40 245 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF624Q9P2J8 865 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCDC66A2RUB6 948 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SNX2O60749 519 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PPFIA2O75334 1257 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AGTP01019 485 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PYGMP11217 842 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 WT1P19544 449 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SPAM1P38567 509 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 C19orf57Q0VDD7 668 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TMEM164Q5U3C3 297 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AGAP9Q5VTM2 703 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KIAA1614Q5VZ46 1190 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CRTC3Q6UUV7 619 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AVL9Q8NBF6 648 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BRSK1Q8TDC3 778 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AHCYL2Q96HN2 611 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TBC1D10AQ9BXI6 508 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OSBPL8Q9BZF1 889 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SEMA4CQ9C0C4 833 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GBA3Q9H227 469 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RSPH14Q9UHP6 348 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 B3GALT1Q9Y5Z6 326 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF462Q96JM2 2506 aa13.46□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MN1Q10571 1320 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ZNF106Q9H2Y7 1883 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 F5H423 210 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GPR39O43194 453 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A9O60656 530 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 C9P02748 559 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A6P19224 532 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A1P22309 533 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A4P22310 534 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.267e-7■□□□□ 8.4
TNFRSF1A-202ENST00000366159 UGT1A3P35503 534 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 VAV2P52735 878 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 RWDD2BP57060 319 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 MC2RQ01718 297 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DMPKQ09013 629 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 CHRNA6Q15825 494 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 INSCQ1MX18 579 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 LINC00303Q3SY05 128 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ANKRD20A2Q5SQ80 823 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ANKRD20A1Q5TYW2 823 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ANKRD20A3Q5VUR7 823 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 AADACL2Q6P093 401 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 GLT6D1Q7Z4J2 308 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ACRBPQ8NEB7 543 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 DDHD1Q8NEL9 900 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 IPMKQ8NFU5 416 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 BLOC1S5Q8TDH9 187 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 NCSTNQ92542 709 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 ART4Q93070 314 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 NKD1Q969G9 470 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 STN1Q9H668 368 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A7Q9HAW7 530 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A10Q9HAW8 530 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 UGT1A8Q9HAW9 530 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SLC40A1Q9NP59 571 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
TNFRSF1A-202ENST00000366159 SMOXQ9NWM0 555 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms