RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 SNPHO15079 494 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 PSIP1O75475 530 aaKnown RBP20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 ALADP13716 330 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 TYRP1P17643 537 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 ARSJQ5FYB0 599 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 ANXA8L1Q5VT79 327 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 SETD9Q8NE22 299 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 POF1BQ8WVV4 589 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 DNAJA3Q96EY1 480 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 CMTM6Q9NX76 183 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 ADGRE2Q9UHX3 823 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 TMEM98Q9Y2Y6 226 aa20.13■□□□□ 0.81
CDC42BPB-201ENST00000361246 SLC4A11Q8NBS3 891 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 TSEN15Q8WW01 171 aaKnown RBP20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 EXD2Q9NVH0 621 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 HCRTO43612 131 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 LRIG2O94898 1065 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A5P35504 534 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 GTF2H2Q13888 395 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 NOMO1Q15155 1222 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 MED22Q15528 200 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 GTF2H2CQ6P1K8 395 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 FAM81AQ8TBF8 368 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 BCO2Q9BYV7 579 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 HMGXB4Q9UGU5 601 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 TCRBV9S1A1TA0A576 114 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 ITGADQ13349 1161 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 LRRC55Q6ZSA7 311 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 PACS2Q86VP3 889 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 ZNF296Q8WUU4 475 aaPredicted RBP20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 BADQ92934 168 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 PPM1MQ96MI6 270 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 NR2E1Q9Y466 385 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 FKBP6O75344 327 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 CHRNGP07510 517 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 PKMP14618 531 aaKnown RBP20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 RTL4Q6ZR62 310 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 RASSF6Q6ZTQ3 369 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 CTU1Q7Z7A3 348 aaKnown RBP20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 C12orf76Q8N812 135 aaPredicted RBP20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 SIPA1Q96FS4 1042 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 MCCC1Q96RQ3 725 aaPredicted RBP20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 NFKBIEO00221 500 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 FGF18O76093 207 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 PLD4Q96BZ4 506 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 SRRDQ9UH36 339 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 SESN1Q9Y6P5 492 aa20.12■□□□□ 0.81
CDC42BPB-201ENST00000361246 DDX6P26196 483 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 RDH11Q8TC12 318 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 ALG2Q9H553 416 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 WDR55Q9H6Y2 383 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 SLC17A7Q9P2U7 560 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 PRMT5O14744 637 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 SERPINA1P01009 418 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 CES1P23141 567 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 PPP1R15BQ5SWA1 713 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 JPH3Q8WXH2 748 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 SLC25A36Q96CQ1 311 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 NECTIN3Q9NQS3 549 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 CORO2BQ9UQ03 480 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A9O60656 530 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 RHOQP17081 205 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A6P19224 532 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A1P22309 533 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A4P22310 534 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A3P35503 534 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 ECT2LQ008S8 904 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 RAB30Q15771 203 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 LCLAT1Q6UWP7 414 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 EEF1AKMT1Q8WVE0 214 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 PAIP1Q9H074 479 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A7Q9HAW7 530 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A10Q9HAW8 530 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 UGT1A8Q9HAW9 530 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 GSTK1Q9Y2Q3 226 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 SUV39H1O43463 412 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 TRMT5Q32P41 509 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 GALNT7Q86SF2 657 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 FRMD6Q96NE9 622 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 GBA3Q9H227 469 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 DBTP11182 482 aaKnown RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 CCDC92Q53HC0 331 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 CUZD1Q86UP6 607 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 SATL1Q86VE3 508 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 KBTBD2Q8IY47 623 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 STYXQ8WUJ0 223 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 SPATA9Q9BWV2 254 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 LRTM1Q9HBL6 345 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 RNF186Q9NXI6 227 aa20.11■□□□□ 0.81
CDC42BPB-201ENST00000361246 OR51F1A6NGY5 319 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 SLC22A3O75751 556 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 FUT4P22083 530 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 LRRC32Q14392 662 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 ATP13A5Q4VNC0 1218 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 MED27Q6P2C8 311 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 YJEFN3A6XGL0 299 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 E7ENQ6 273 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 PSME3P61289 254 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 PIWIL2Q8TC59 973 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms