RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 METTL3Q86U44 580 aaKnown RBP13.61□□□□□ -0.23
VCP-201ENST00000358901 NODALQ96S42 347 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 GPR88Q9GZN0 384 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 MAF1Q9H063 256 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 C9IYK1 514 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 HCRTO43612 131 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 RGS10O43665 173 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 ACSL4O60488 711 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 UGT2B15P54855 530 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 GJA9P57773 515 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 INHBEP58166 350 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SMIM11AP58511 58 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 TIGD5Q53EQ6 642 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 GPAT3Q53EU6 434 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SERPINA13PQ6UXR4 307 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 AHSA2Q719I0 299 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SLC34A3Q8N130 599 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SLC35F5Q8WV83 523 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 DNAJC11Q9NVH1 559 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 RBPJLQ9UBG7 517 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SIX4Q9UIU6 781 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 PSAT1Q9Y617 370 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 FMN2Q9NZ56 1722 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 DNAJA2O60884 412 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 AHSGP02765 367 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 DLDP09622 509 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PRKCHP24723 683 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 SLC7A1P30825 629 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CCR4P51679 360 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 NAE1Q13564 534 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 ZNF554Q86TJ5 538 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CAMKK1Q8N5S9 505 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 FAIM2Q9BWQ8 316 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CIDEBQ9UHD4 219 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PDLIM1O00151 329 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 INSIG1O15503 277 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CLDN9O95484 217 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 SERPINA1P01009 418 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 DLK2Q6UY11 383 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PIK3C3Q8NEB9 887 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 OR13C4Q8NGS5 318 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 BCO2Q9BYV7 579 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 MAGEH1Q9H213 219 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CLEC4MQ9H2X3 399 aaPredicted RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 TRNAU1APQ9NX07 287 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 ZDHHC2Q9UIJ5 367 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 MYH8P13535 1937 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 TP73O15350 636 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 IRAK2O43187 625 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 UGT2B11O75310 529 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 MTHFD1P11586 935 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 BUD31P41223 144 aaPredicted RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 NDST2P52849 883 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CCNYL2Q5T2Q4 361 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 FAM20CQ8IXL6 584 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 OR4A15Q8NGL6 344 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 OR52J3Q8NH60 311 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 HPS1Q92902 700 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 COQ7Q99807 217 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 FNDC11Q9BVV2 318 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 NUDT4Q9NZJ9 180 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 SERPINB7O75635 380 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CDK14O94921 469 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 ACADMP11310 421 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 MANFP55145 182 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 CACNG1Q06432 222 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 IL10RBQ08334 325 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 SFSWAPQ12872 951 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 GTF2H2Q13888 395 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 CARTPTQ16568 116 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PLEKHG4Q58EX7 1191 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 MZT2BQ6NZ67 158 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 GTF2H2CQ6P1K8 395 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 KCTD8Q6ZWB6 473 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 C16orf62Q7Z3J2 963 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 TMPRSS11BQ86T26 416 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 IZUMO1Q8IYV9 350 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 ZBTB2Q8N680 514 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 PQLC3Q8N755 202 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 ST13P5Q8NFI4 369 aaPredicted RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 ZFP28Q8NHY6 868 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 MAGEB10Q96LZ2 347 aaPredicted RBP13.6□□□□□ -0.23
VCP-201ENST00000358901 SLC38A2Q96QD8 506 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 OLFM1Q99784 485 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 LRRC42Q9Y546 428 aa13.6□□□□□ -0.23
VCP-201ENST00000358901 TRIM17Q9Y577 477 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms