RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 FAM71DQ8N9W8 422 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 ATP11CQ8NB49 1132 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 CPT1BQ92523 772 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 RNF34Q969K3 372 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 JMJD8Q96S16 334 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 RBM15Q96T37 977 aaKnown RBP eCLIP7□□□□□ -1.29
VPS13A-201ENST00000355766 LGMNQ99538 433 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 CCDC77Q9BR77 488 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 NAT9Q9BTE0 207 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 TRIM31Q9BZY9 425 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 PCED1AQ9H1Q7 454 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 TNFRSF12AQ9NP84 129 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 ITM2CQ9NQX7 267 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 TMEM248Q9NWD8 314 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 GOLGA6AQ9NYA3 693 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 PRR13Q9NZ81 148 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 SUCOQ9UBS9 1254 aaKnown RBP7□□□□□ -1.29
VPS13A-201ENST00000355766 FAM153AQ9UHL3 310 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 SH3BP1Q9Y3L3 701 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 HEY1Q9Y5J3 304 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 NFS1Q9Y697 457 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 SLCO1B1Q9Y6L6 691 aa7□□□□□ -1.29
VPS13A-201ENST00000355766 MGAQ8IWI9 3026 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 DRGXA6NNA5 263 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 NEDD8-MDP1E9PL57 170 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 H0Y8X5 98 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 I6L893 689 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 AGPSO00116 658 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ALOX15BO15296 676 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 KCNN4O15554 427 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 PSMD3O43242 534 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 COCHO43405 550 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CREB3O43889 395 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 C1SP09871 688 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CCNCP24863 283 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 OXTRP30559 389 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 PHBP35232 272 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 RPL22P35268 128 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ATP5C1P36542 298 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ETFBP38117 255 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 MAGEA3P43357 314 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 SLC11A2P49281 568 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 HARS2P49590 506 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ACADVLP49748 655 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 TPMTP51580 245 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 YBEYP58557 167 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 MRPS25P82663 173 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF844Q08AG5 666 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ILF2Q12905 390 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 FRG1Q14331 258 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 PARP6Q2NL67 630 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CCDC38Q502W7 563 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 RAB6CQ53S08 254 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 RABGAP1LQ5R372 815 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 C10orf120Q5SQS8 335 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 AGBL2Q5U5Z8 902 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ARHGEF18Q6ZSZ5 1173 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CYS1Q717R9 158 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CHST9Q7L1S5 443 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 NLRP14Q86W24 1093 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 FAM129CQ86XR2 697 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 TMEM25Q86YD3 366 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 TDRPQ86YL5 185 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CCDC117Q8IWD4 279 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF683Q8IZ20 524 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ARFGAP2Q8N6H7 521 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 UBLCP1Q8WVY7 318 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 SNX19Q92543 992 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 NDRG1Q92597 394 aaKnown RBP6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ATP6V1G3Q96LB4 118 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 DHRS1Q96LJ7 313 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF599Q96NL3 588 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 SERPINB12Q96P63 405 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ZIM3Q96PE6 472 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 SPON2Q9BUD6 331 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ZYG11BQ9C0D3 744 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 RAB6CQ9H0N0 254 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 TM9SF3Q9HD45 589 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 GPATCH2LQ9NWQ4 482 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 OSER1Q9NX31 292 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 PLAAQ9Y263 795 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ANKRD6Q9Y2G4 727 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF510Q9Y2H8 683 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ATP8A1Q9Y2Q0 1164 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 STON1Q9Y6Q2 735 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 CEP192Q8TEP8 1941 aa6.99□□□□□ -1.29
VPS13A-201ENST00000355766 ANAPC1Q9H1A4 1944 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 A0A087WUV0 522 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 WASH3PC4AMC7 463 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 RNF103O00237 685 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CBX4O00257 560 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 CDH16O75309 829 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SUN1O94901 812 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 SYF2O95926 243 aaKnown RBP6.98□□□□□ -1.29
VPS13A-201ENST00000355766 AGTP01019 485 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 GSNP06396 782 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 TYRP14679 529 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 RBL1P28749 1068 aa6.98□□□□□ -1.29
VPS13A-201ENST00000355766 OAS2P29728 719 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms