RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PLIN5Q00G26 463 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 TEAD2Q15562 447 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PPM1JQ5JR12 505 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 KIAA1324Q6UXG2 1013 aaKnown RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ANKRD33Q7Z3H0 272 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 CHCHD4Q8N4Q1 142 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 TTLL2Q9BWV7 592 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PCBD2Q9H0N5 130 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 OXSMQ9NWU1 459 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 CCDC85CA6NKD9 419 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ATP6V1G1O75348 118 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PIAS1O75925 651 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ETS2P15036 469 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 GPC1P35052 558 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 GRIA1P42261 906 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PITRM1Q5JRX3 1037 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ATXN7L2Q5T6C5 722 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 CLNKQ7Z7G1 428 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 TMEM135Q86UB9 458 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 DENND6AQ8IWF6 608 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ZMIZ2Q8NF64 920 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ING5Q8WYH8 240 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 IRF7Q92985 503 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 NMD3Q96D46 503 aaKnown RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 SPAG4Q9NPE6 437 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 MOCS1Q9NZB8 636 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 URADA6NGE7 173 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 F8W810 466 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 RPL34P49207 117 aaKnown RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ALFQ53S48 1182 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ANXA8L1Q5VT79 327 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 DET1Q7L5Y6 550 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 C3orf58Q8NDZ4 430 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 EZH1Q92800 747 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 FATE1Q969F0 183 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 TRIB3Q96RU7 358 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 CDRT15Q96T59 188 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 AARSD1Q9BTE6 412 aaKnown RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ENOPH1Q9UHY7 261 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 H3BM21 787 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ENO2P09104 434 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PPP2R1BP30154 601 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 S100A5P33763 92 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 CHRNA4P43681 627 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 WDR4P57081 412 aaKnown RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 CLCQ05315 142 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 NDUFA5Q16718 116 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 PLEKHG6Q3KR16 790 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 FUT11Q495W5 492 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 OR9Q1Q8NGQ5 310 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 ZFP28Q8NHY6 868 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 KRCC1Q9NPI7 259 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 RABL2AQ9UBK7 228 aaPredicted RBP12.05□□□□□ -0.48
SMAD9-201ENST00000350148 MFHAS1Q9Y4C4 1052 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 DNAJA2O60884 412 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 LYPLA1O75608 230 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CDK14O94921 469 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 AP2A2O94973 939 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ALBP02768 609 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 SRPRAP08240 638 aaKnown RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 IMPDH1P20839 514 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CBX2Q14781 532 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CCDC85BQ15834 202 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 C19orf60Q96EN9 201 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 TBC1D10AQ9BXI6 508 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 UPK3BL1B0FP48 263 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 UPK3BL2E5RIL1 263 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 NDUFS2O75306 463 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 PSMD8P48556 350 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 PSME3P61289 254 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 EIF4HQ15056 248 aaKnown RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 MPP7Q5T2T1 576 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 GATAD2AQ86YP4 633 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ARL5AQ9Y689 179 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 NPC1O15118 1278 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 GJB5O95377 273 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 OCM2P0CE71 109 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 OCMP0CE72 109 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 NME5P56597 212 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 LRRC74AQ0VAA2 488 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 GRSF1Q12849 480 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 KLF10Q13118 480 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 HERC3Q15034 1050 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ARL13AQ5H913 290 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CNSTQ6PJW8 725 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CPXM2Q8N436 756 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CDYL2Q8N8U2 506 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 DNAJB8Q8NHS0 232 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 BADQ92934 168 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CCDC3Q9BQI4 270 aa12.04□□□□□ -0.48
SMAD9-201ENST00000350148 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms