RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 TBC1D3Q8IZP1 549 aaPredicted RBP16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 PJA1Q8NG27 643 aa16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 NAT14Q8WUY8 206 aa16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 ANKRD49Q8WVL7 239 aa16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 NXNL1Q96CM4 212 aa16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 GPR78Q96P69 363 aa16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 USP36Q9P275 1121 aaKnown RBP16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 RUVBL2Q9Y230 463 aaKnown RBP16.16■□□□□ 0.18
CEACAM1-202ENST00000344391 CFAP99D6REC4 459 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 E5RI56 91 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 SLC25A14O95258 325 aaPredicted RBP16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 IGLV3-19P01714 112 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 CCDC166P0CW27 439 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 ATP1B2P14415 290 aaPredicted RBP16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 ZNF37AP17032 561 aaPredicted RBP16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 MSH3P20585 1137 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 AKT1P31749 480 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 CLCN7P51798 805 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 CCDC153Q494R4 210 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 KHDC1Q4VXA5 237 aaKnown RBP16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 PAQR3Q6TCH7 311 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 PHYKPLQ8IUZ5 450 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 PGBD3Q8N328 593 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 PLA2G15Q8NCC3 412 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 ARMC2Q8NEN0 867 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 CD200R1Q8TD46 325 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 DYDC1Q8WWB3 177 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 DCUN1D1Q96GG9 259 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 SLC30A3Q99726 388 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 PAIP2Q9BPZ3 127 aaKnown RBP16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 CHRDQ9H2X0 955 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 SYTL2Q9HCH5 934 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 IGSF5Q9NSI5 407 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 MBD1Q9UIS9 605 aaPredicted RBP16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 DHRS7Q9Y394 339 aa16.15■□□□□ 0.18
CEACAM1-202ENST00000344391 PRR23AA6NEV1 266 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 STK25O00506 426 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 INPP4BO15327 924 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SHOX2O60902 331 aaPredicted RBP16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 MTX2O75431 263 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 PAK4O96013 591 aaPredicted RBP16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 PROCP04070 461 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 LTA4HP09960 611 aaKnown RBP16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 RALBP11234 206 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 ACSL1P33121 698 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 GNGT1P63211 74 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 ZXDAP98168 799 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 IL9RQ01113 521 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SGCGQ13326 291 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 CSHL1Q14406 222 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 FAM83EQ2M2I3 478 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 TSNAXIP1Q2TAA8 658 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 ANO7Q6IWH7 933 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 UGT3A1Q6NUS8 523 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 PNCKQ6P2M8 343 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 ADAMTSL4Q6UY14 1074 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SPATA6LQ8N4H0 392 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SIDT2Q8NBJ9 832 aaKnown RBP16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 TP53I13Q8NBR0 393 aaPredicted RBP16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 TSTD1Q8NFU3 115 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 GIMAP7Q8NHV1 300 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 LKAAEAR1Q8TD35 194 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 CKAP2Q8WWK9 683 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 ASB12Q8WXK4 309 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SLC17A9Q9BYT1 436 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 BTBD1Q9H0C5 482 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 NMRAL1Q9HBL8 299 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SGK2Q9HBY8 427 aa16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 TRMT6Q9UJA5 497 aaKnown RBP16.14■□□□□ 0.17
CEACAM1-202ENST00000344391 SGTAO43765 313 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 AP2A2O94973 939 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 OR56A5P0C7T3 313 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 TEAD1P28347 426 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 RPS9P46781 194 aaKnown RBP16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 SERPINB4P48594 390 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 PPP2CBP62714 309 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 PPP2CAP67775 309 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 TMEM115Q12893 351 aaPredicted RBP16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 ZNF648Q5T619 568 aaPredicted RBP16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 AGAP9Q5VTM2 703 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 TAX1BP1Q86VP1 789 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 TMEM151AQ8N4L1 468 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 SPEM1Q8N4L4 309 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 OR2T34Q8NGX1 318 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 KLK6Q92876 244 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 HHIPQ96QV1 700 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 CCDC134Q9H6E4 229 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 MBNL1Q9NR56 388 aaKnown RBP16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 LATS2Q9NRM7 1088 aa16.13■□□□□ 0.17
CEACAM1-202ENST00000344391 LRRC72A6NJI9 287 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 C10orf142B7Z368 130 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 TRIM16O95361 564 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 PCCBP05166 539 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 ITGB6P18564 788 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 LSP1P33241 339 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 GLRBP48167 497 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 IRX4P78413 519 aa16.12■□□□□ 0.17
CEACAM1-202ENST00000344391 TMEM31Q5JXX7 168 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms