RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SLC30A1Q9Y6M5 507 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 CHEK2O96017 543 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 SPATA31D3P0C874 917 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 NFYCQ13952 458 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 TGFBIQ15582 683 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 RABL3Q5HYI8 236 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 SPATA31D4Q6ZUB0 917 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 GPRIN3Q6ZVF9 776 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 ARL14EPQ8N8R7 260 aaPredicted RBP14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 OR56A4Q8NGH8 313 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 LRRC58Q96CX6 371 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 HIPK3Q9H422 1215 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 PIF1Q9H611 641 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 GPR45Q9Y5Y3 372 aa14.74□□□□□ -0.05
VIPAS39-202ENST00000343765 A0A1B0GTW7 788 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 FAM149AA5PLN7 773 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 SAC3D1A6NKF1 404 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 KCNK10P57789 538 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 SEMG2Q02383 582 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 VEPH1Q14D04 833 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 TIGD2Q4W5G0 525 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 TXNDC8Q6A555 127 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 FNDC5Q8NAU1 212 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 BOCQ9BWV1 1114 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 BACE2Q9Y5Z0 518 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 E2F3O00716 465 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 STX16O14662 325 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 KATNA1O75449 491 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 MLYCDO95822 493 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 GUCA1CO95843 209 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 CLPTM1O96005 669 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 UROSP10746 265 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 SLC6A2P23975 617 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 CA5AP35218 305 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 ZXDBP98169 803 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 IKBKEQ14164 716 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 BLOC1S3Q6QNY0 202 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 RIN3Q8TB24 985 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 KCNJ9Q92806 393 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 HOPXQ9BPY8 73 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 EFHD1Q9BUP0 239 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 GRIP2Q9C0E4 1043 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 GID8Q9NWU2 228 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 SLAMF8Q9P0V8 285 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 PITPNM1O00562 1244 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 SMAD6O43541 496 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 MATN4O95460 622 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 FAM58BPP0C7Q3 252 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 MTHFD1P11586 935 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 CA8P35219 290 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 PTGER3P43115 390 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 HSPA13P48723 471 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 IRX1P78414 480 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 PLA2G4EQ3MJ16 856 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 AARS2Q5JTZ9 985 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 PAGE3Q5JUK9 113 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 TBCELQ5QJ74 424 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 PTRHD1Q6GMV3 140 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 LETMD1Q6P1Q0 360 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 APCDD1Q8J025 514 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 GALNT15Q8N3T1 639 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 CLDN19Q8N6F1 224 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 NUDT8Q8WV74 236 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 MYO19Q96H55 970 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 IL17CQ9P0M4 197 aa14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 EVLQ9UI08 416 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-202ENST00000343765 ASPDHA6ND91 283 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 CNPP09543 421 aaKnown RBP14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 NCK1P16333 377 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 PSMC3P17980 439 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 HTR6P50406 440 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 CLCN7P51798 805 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 ERVPABLB-1P60509 514 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 TXNDC11Q6PKC3 985 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 HHIPL1Q96JK4 782 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 ZFRQ96KR1 1074 aaKnown RBP14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 TMEM74Q96NL1 305 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 RETREG1Q9H6L5 497 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 ZNF334Q9HCZ1 680 aaPredicted RBP14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 AIG1Q9NVV5 245 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 V9GYQ6 96 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 MYO7AQ13402 2215 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 CCDC160A6NGH7 325 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 AP1G1O43747 822 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 KLK8O60259 260 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 SYNCRIPO60506 623 aaKnown RBP14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 VPS4BO75351 444 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 TNFAIP8O95379 198 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 PRAMEF1O95521 474 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 ESR1P03372 595 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 CACNG1Q06432 222 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 ARMC12Q5T9G4 340 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 TMEM150AQ86TG1 271 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 MINDY1Q8N5J2 469 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 MYRFLQ96LU7 910 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 APOL5Q9BWW9 433 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 CIPCQ9C0C6 399 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 ABCD2Q9UBJ2 740 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 USP22Q9UPT9 525 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms