RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PSMC3P17980 439 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 CCR10P46092 362 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 ADAM15Q13444 863 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 ELAVL3Q14576 367 aaKnown RBP16.07■□□□□ 0.16
HPS1-202ENST00000338546 PFKFB4Q16877 469 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 VWA5B1Q5TIE3 1220 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 ANKS6Q68DC2 871 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 NUDT18Q6ZVK8 323 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 TREML1Q86YW5 311 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 TMPRSS6Q8IU80 811 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 CLYBLQ8N0X4 340 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 TRAM1L1Q8N609 369 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 OR8D1Q8WZ84 308 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 FAM136AQ96C01 138 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 ZFYVE19Q96K21 471 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 ZSCAN5AQ9BUG6 496 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 TBC1D10AQ9BXI6 508 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 MEAF6Q9HAF1 191 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.07■□□□□ 0.16
HPS1-202ENST00000338546 GTSE1Q9NYZ3 720 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 LMCD1Q9NZU5 365 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 TRAF6Q9Y4K3 522 aa16.07■□□□□ 0.16
HPS1-202ENST00000338546 KIAA1549LQ6ZVL6 1849 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 OTOL1A6NHN0 477 aaPredicted RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 A8MX80 341 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 PRR5-ARHGAP8B1AHC4 643 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 CDC7O00311 574 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 QSOX1O00391 747 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 GPR39O43194 453 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 AP2A2O94973 939 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 RPS17P08708 135 aaKnown RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 OR56A5P0C7T3 313 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 BMP1P13497 986 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 ENO3P13929 434 aaPredicted RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 ITGB7P26010 798 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 MMP12P39900 470 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 ARHGAP8P85298 464 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 CDC16Q13042 620 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 ATP13A5Q4VNC0 1218 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 FNDC3BQ53EP0 1204 aaKnown RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 C9orf64Q5T6V5 341 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 METTL2BQ6P1Q9 378 aaKnown RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 MYO1HQ8N1T3 1032 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 KIF2BQ8N4N8 673 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 ZBTB2Q8N680 514 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 CEP70Q8NHQ1 597 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 NXPE3Q969Y0 559 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 MOCOSQ96EN8 888 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 BOCQ9BWV1 1114 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 NUF2Q9BZD4 464 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 TMEM245Q9H330 911 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 MMADHCQ9H3L0 296 aaPredicted RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 KLC4Q9NSK0 619 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 KCTD5Q9NXV2 234 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 SUN2Q9UH99 717 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 PPM1HQ9ULR3 514 aa16.06■□□□□ 0.16
HPS1-202ENST00000338546 TNPO3Q9Y5L0 923 aaKnown RBP16.06■□□□□ 0.16
HPS1-202ENST00000338546 NPEPPSL1A6NEC2 478 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 CFAP99D6REC4 459 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 KPNA5O15131 536 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 GYG2O15488 501 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 SNX2O60749 519 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 MLYCDO95822 493 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 KRT16P08779 473 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 CA5AP35218 305 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 IRX1P78414 480 aaPredicted RBP16.05■□□□□ 0.16
HPS1-202ENST00000338546 ELP6Q0PNE2 266 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 RALGDSQ12967 914 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 LCP2Q13094 533 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 LSM12Q3MHD2 195 aaKnown RBP16.05■□□□□ 0.16
HPS1-202ENST00000338546 CDKL4Q5MAI5 379 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 CYP2U1Q7Z449 544 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 TECPR1Q7Z6L1 1165 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 DSG4Q86SJ6 1040 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 ARHGAP24Q8N264 748 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 CHCHD4Q8N4Q1 142 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 TEX9Q8N6V9 391 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 MYLIPQ8WY64 445 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 PPP1R16AQ96I34 528 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 RIPOR3Q96MK2 946 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 VPS35Q96QK1 796 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 OR52B2Q96RD2 323 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 SARS2Q9NP81 518 aaKnown RBP16.05■□□□□ 0.16
HPS1-202ENST00000338546 IKZF3Q9UKT9 509 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 PRSS21Q9Y6M0 314 aa16.05■□□□□ 0.16
HPS1-202ENST00000338546 MUC22E2RYF6 1773 aaPredicted RBP16.05■□□□□ 0.16
HPS1-202ENST00000338546 IQCF5A8MTL0 148 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 NPC1O15118 1278 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
HPS1-202ENST00000338546 NCF2P19878 526 aaPredicted RBP16.04■□□□□ 0.16
HPS1-202ENST00000338546 GJA4P35212 333 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 OPRD1P41143 372 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 CLCQ05315 142 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 UBAP2LQ14157 1087 aaKnown RBP16.04■□□□□ 0.16
HPS1-202ENST00000338546 TGFBIQ15582 683 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 DNAL1Q4LDG9 190 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 HENMT1Q5T8I9 393 aaKnown RBP16.04■□□□□ 0.16
HPS1-202ENST00000338546 EFL1Q7Z2Z2 1120 aaKnown RBP16.04■□□□□ 0.16
HPS1-202ENST00000338546 HSD11B1LQ7Z5J1 315 aa16.04■□□□□ 0.16
HPS1-202ENST00000338546 AGR3Q8TD06 166 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms