RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 MPOP05164 745 aa15.05■□□□□ -0
PRKN-201ENST00000338468 ZSCAN5DPP0CG00 497 aa15.05■□□□□ -0
PRKN-201ENST00000338468 TPH1P17752 444 aa15.05■□□□□ -0
PRKN-201ENST00000338468 CLCNKAP51800 687 aa15.05■□□□□ -0
PRKN-201ENST00000338468 CTSCP53634 463 aa15.05■□□□□ -0
PRKN-201ENST00000338468 OR1D5P58170 312 aa15.05■□□□□ -0
PRKN-201ENST00000338468 TMEM115Q12893 351 aaPredicted RBP15.05■□□□□ -0
PRKN-201ENST00000338468 PEX6Q13608 980 aa15.05■□□□□ -0
PRKN-201ENST00000338468 CCNG2Q16589 344 aa15.05■□□□□ -0
PRKN-201ENST00000338468 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.05■□□□□ -0
PRKN-201ENST00000338468 GPRC6AQ5T6X5 926 aa15.05■□□□□ -0
PRKN-201ENST00000338468 DRICH1Q6PGQ1 229 aaPredicted RBP15.05■□□□□ -0
PRKN-201ENST00000338468 IYDQ6PHW0 289 aa15.05■□□□□ -0
PRKN-201ENST00000338468 ZNF605Q86T29 641 aa15.05■□□□□ -0
PRKN-201ENST00000338468 DDHD1Q8NEL9 900 aa15.05■□□□□ -0
PRKN-201ENST00000338468 ZNF398Q8TD17 642 aa15.05■□□□□ -0
PRKN-201ENST00000338468 PRR11Q96HE9 360 aaPredicted RBP15.05■□□□□ -0
PRKN-201ENST00000338468 GFM1Q96RP9 751 aaKnown RBP15.05■□□□□ -0
PRKN-201ENST00000338468 SYNDIG1Q9H7V2 258 aa15.05■□□□□ -0
PRKN-201ENST00000338468 ETNK1Q9HBU6 452 aa15.05■□□□□ -0
PRKN-201ENST00000338468 PIH1D1Q9NWS0 290 aaKnown RBP15.05■□□□□ -0
PRKN-201ENST00000338468 FEZ2Q9UHY8 353 aaPredicted RBP15.05■□□□□ -0
PRKN-201ENST00000338468 KIF26BQ2KJY2 2108 aa15.05■□□□□ -0
PRKN-201ENST00000338468 UNC13CQ8NB66 2214 aa15.04■□□□□ -0
PRKN-201ENST00000338468 AGAP14A8MT82 685 aa15.04■□□□□ -0
PRKN-201ENST00000338468 CCL22O00626 93 aa15.04■□□□□ -0
PRKN-201ENST00000338468 CEP104O60308 925 aa15.04■□□□□ -0
PRKN-201ENST00000338468 SRP72O76094 671 aaKnown RBP15.04■□□□□ -0
PRKN-201ENST00000338468 CRTAMO95727 393 aa15.04■□□□□ -0
PRKN-201ENST00000338468 IFNB1P01574 187 aa15.04■□□□□ -0
PRKN-201ENST00000338468 ZNF7P17097 686 aaPredicted RBP15.04■□□□□ -0
PRKN-201ENST00000338468 FASLGP48023 281 aa15.04■□□□□ -0
PRKN-201ENST00000338468 LSSP48449 732 aa15.04■□□□□ -0
PRKN-201ENST00000338468 KCTD19Q17RG1 926 aaPredicted RBP15.04■□□□□ -0
PRKN-201ENST00000338468 PLA2G4EQ3MJ16 856 aa15.04■□□□□ -0
PRKN-201ENST00000338468 LRRTM4Q86VH4 590 aa15.04■□□□□ -0
PRKN-201ENST00000338468 RASGEF1AQ8N9B8 481 aa15.04■□□□□ -0
PRKN-201ENST00000338468 GRAMD1AQ96CP6 724 aa15.04■□□□□ -0
PRKN-201ENST00000338468 CCDC97Q96F63 343 aaPredicted RBP15.04■□□□□ -0
PRKN-201ENST00000338468 C19orf43Q9BQ61 176 aa15.04■□□□□ -0
PRKN-201ENST00000338468 TIMM29Q9BSF4 260 aa15.04■□□□□ -0
PRKN-201ENST00000338468 FOXP3Q9BZS1 431 aa15.04■□□□□ -0
PRKN-201ENST00000338468 POLR1BQ9H9Y6 1135 aa15.04■□□□□ -0
PRKN-201ENST00000338468 PRDM8Q9NQV8 689 aa15.04■□□□□ -0
PRKN-201ENST00000338468 KLC4Q9NSK0 619 aa15.04■□□□□ -0
PRKN-201ENST00000338468 SCHIP1Q9P0W5 487 aaPredicted RBP15.04■□□□□ -0
PRKN-201ENST00000338468 SATB2Q9UPW6 733 aa15.04■□□□□ -0
PRKN-201ENST00000338468 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
PRKN-201ENST00000338468 TENM4Q6N022 2769 aa15.03■□□□□ -0
PRKN-201ENST00000338468 TEX51A0A1B0GUA7 166 aa15.03■□□□□ -0
PRKN-201ENST00000338468 RHPN2P1A8MT19 583 aa15.03■□□□□ -0
PRKN-201ENST00000338468 KMOO15229 486 aa15.03■□□□□ -0
PRKN-201ENST00000338468 PSMD3O43242 534 aa15.03■□□□□ -0
PRKN-201ENST00000338468 SNX2O60749 519 aa15.03■□□□□ -0
PRKN-201ENST00000338468 DXOO77932 396 aaKnown RBP15.03■□□□□ -0
PRKN-201ENST00000338468 SUN1O94901 812 aa15.03■□□□□ -0
PRKN-201ENST00000338468 F3P13726 295 aa15.03■□□□□ -0
PRKN-201ENST00000338468 PSMA3P25788 255 aa15.03■□□□□ -0
PRKN-201ENST00000338468 CD1CP29017 333 aa15.03■□□□□ -0
PRKN-201ENST00000338468 RPL22P35268 128 aaKnown RBP15.03■□□□□ -0
PRKN-201ENST00000338468 GRIA1P42261 906 aa15.03■□□□□ -0
PRKN-201ENST00000338468 GPR3P46089 330 aa15.03■□□□□ -0
PRKN-201ENST00000338468 GABREP78334 506 aa15.03■□□□□ -0
PRKN-201ENST00000338468 TMPRSS15P98073 1019 aa15.03■□□□□ -0
PRKN-201ENST00000338468 CFHR1Q03591 330 aa15.03■□□□□ -0
PRKN-201ENST00000338468 ZFP36L1Q07352 338 aaKnown RBP15.03■□□□□ -0
PRKN-201ENST00000338468 NFATC2Q13469 925 aa15.03■□□□□ -0
PRKN-201ENST00000338468 SEMA5AQ13591 1074 aa15.03■□□□□ -0
PRKN-201ENST00000338468 ITGA9Q13797 1035 aa15.03■□□□□ -0
PRKN-201ENST00000338468 LDLRAP1Q5SW96 308 aa15.03■□□□□ -0
PRKN-201ENST00000338468 ZNF574Q6ZN55 896 aaPredicted RBP15.03■□□□□ -0
PRKN-201ENST00000338468 ZNF761Q86XN6 746 aaPredicted RBP15.03■□□□□ -0
PRKN-201ENST00000338468 SLITRK4Q8IW52 837 aa15.03■□□□□ -0
PRKN-201ENST00000338468 ZNF843Q8N446 348 aa15.03■□□□□ -0
PRKN-201ENST00000338468 PRELID2Q8N945 189 aa15.03■□□□□ -0
PRKN-201ENST00000338468 OR52K1Q8NGK4 314 aa15.03■□□□□ -0
PRKN-201ENST00000338468 SNIP1Q8TAD8 396 aaKnown RBP15.03■□□□□ -0
PRKN-201ENST00000338468 GDAP1Q8TB36 358 aa15.03■□□□□ -0
PRKN-201ENST00000338468 NAT14Q8WUY8 206 aa15.03■□□□□ -0
PRKN-201ENST00000338468 DNAJC1Q96KC8 554 aaKnown RBP15.03■□□□□ -0
PRKN-201ENST00000338468 ASCL3Q9NQ33 180 aa15.03■□□□□ -0
PRKN-201ENST00000338468 ZKSCAN5Q9Y2L8 839 aa15.03■□□□□ -0
PRKN-201ENST00000338468 IGHV1OR21-1A0A087WYE8 117 aa15.02■□□□□ -0
PRKN-201ENST00000338468 MROH6A6NGR9 719 aa15.02■□□□□ -0
PRKN-201ENST00000338468 SGTAO43765 313 aa15.02■□□□□ -0
PRKN-201ENST00000338468 BRAFP15056 766 aa15.02■□□□□ -0
PRKN-201ENST00000338468 ALDH4A1P30038 563 aa15.02■□□□□ -0
PRKN-201ENST00000338468 CCKBRP32239 447 aa15.02■□□□□ -0
PRKN-201ENST00000338468 FDFT1P37268 417 aa15.02■□□□□ -0
PRKN-201ENST00000338468 KCNJ1P48048 391 aa15.02■□□□□ -0
PRKN-201ENST00000338468 INHBCP55103 352 aa15.02■□□□□ -0
PRKN-201ENST00000338468 UBE2IP63279 158 aaKnown RBP15.02■□□□□ -0
PRKN-201ENST00000338468 PDE1BQ01064 536 aa15.02■□□□□ -0
PRKN-201ENST00000338468 POU6F1Q14863 301 aa15.02■□□□□ -0
PRKN-201ENST00000338468 LONRF2Q1L5Z9 754 aa15.02■□□□□ -0
PRKN-201ENST00000338468 INSCQ1MX18 579 aa15.02■□□□□ -0
PRKN-201ENST00000338468 TBC1D25Q3MII6 688 aa15.02■□□□□ -0
PRKN-201ENST00000338468 AMZ1Q400G9 498 aa15.02■□□□□ -0
PRKN-201ENST00000338468 C3orf38Q5JPI3 329 aa15.02■□□□□ -0
PRKN-201ENST00000338468 NKAIN2Q5VXU1 208 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms