RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CLPPQ16740 277 aaPredicted RBP13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 INSCQ1MX18 579 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 IPMKQ8NFU5 416 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 BLOC1S5Q8TDH9 187 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 FCRL5Q96RD9 977 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 GORASP1Q9BQQ3 440 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 SPRY4Q9C004 299 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 IL17CQ9P0M4 197 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 WDR37Q9Y2I8 494 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 REXO2Q9Y3B8 237 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 PCDHGA3Q9Y5H0 932 aa13.17□□□□□ -0.3
NUDCD3-201ENST00000338427 A0A0U1RQJ8 604 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 H7C0C1 242 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 KMOO15229 486 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 DUX1O43812 170 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 FAM87AP0C7U9 286 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 LIFP15018 202 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 ATP5OP48047 213 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 LEPRP48357 1165 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 CLCNKAP51800 687 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 CTSCP53634 463 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 DCDC1P59894 354 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 MC2RQ01718 297 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 TMEM220Q6QAJ8 160 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 SARM1Q6SZW1 724 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 FAM151BQ6UXP7 276 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 LRRTM4Q86VH4 590 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 RASGEF1AQ8N9B8 481 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 MED8Q96G25 268 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 SLC12A9Q9BXP2 914 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
NUDCD3-201ENST00000338427 KIR2DS5A0A0G2JLQ3 304 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 A0A0G2JNG1 304 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 PDZK1P1A8MUH7 402 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 B4E171 279 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 B8ZZF3 427 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 STMND1H3BQB6 276 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 KIR2DS3K7RE56 304 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 GAPDHSO14556 408 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 NKX2-8O15522 239 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 RAD1O60671 282 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 VIPP01282 170 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 ITGB6P18564 788 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 XRCC1P18887 633 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 HMGCLP35914 325 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 TSPAN7P41732 249 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 SEPHS1P49903 392 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 ZNF75DP51815 510 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 SH3BP2P78314 561 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 NFATC3Q12968 1075 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 KIR2DS5Q14953 304 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 SLC14A2Q15849 920 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 DCAF12Q5T6F0 453 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 FAM83HQ6ZRV2 1179 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 TMEM26Q6ZUK4 368 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 BZW1Q7L1Q6 419 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 PHYKPLQ8IUZ5 450 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 CACNA2D3Q8IZS8 1091 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 IL22RA1Q8N6P7 574 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 BEND7Q8N7W2 519 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 SH3KBP1Q96B97 665 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 QKIQ96PU8 341 aaKnown RBP eCLIP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 LACRTQ9GZZ8 138 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 RSPH14Q9UHP6 348 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 PSMD13Q9UNM6 376 aa13.15□□□□□ -0.3
NUDCD3-201ENST00000338427 HELZ2Q9BYK8 2649 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 OR5K4A6NMS3 321 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 VEGFDO43915 354 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 EPOP01588 193 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ZNF28P17035 718 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 AMD1P17707 334 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 CD82P27701 267 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 PPP1CAP62136 330 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 SPA17Q15506 151 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ABRAXAS1Q6UWZ7 409 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 BBS12Q6ZW61 710 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms