RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CD27P26842 260 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 AKT1P31749 480 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 SFSWAPQ12872 951 aaKnown RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 FRG1Q14331 258 aaKnown RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 MROH9Q5TGP6 573 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 ADAMTSL4Q6UY14 1074 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 ABI3BPQ7Z7G0 1075 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 LRRC6Q86X45 466 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 CEP97Q8IW35 865 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 SFTPA2Q8IWL1 248 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 RBFAQ8N0V3 343 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 CCL4L1Q8NHW4 92 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 OR1E3Q8WZA6 343 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 SGSM3Q96HU1 749 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 HIC2Q96JB3 615 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 SMOXQ9NWM0 555 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 SLC23A2Q9UGH3 650 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 IGLV3-16A0A075B6K0 115 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 RGSL1A5PLK6 1076 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 A6NNZ2 444 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 FPGTO14772 594 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 CLGNO14967 610 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 LILRB5O75023 590 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 ASMTLO95671 621 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 THEGLP0DJG4 465 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 PMLP29590 882 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 PBLDP30039 288 aaPredicted RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 AKT2P31751 481 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 PHBP35232 272 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 LEPRP48357 1165 aaKnown RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 CSE1LP55060 971 aaKnown RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 TMEM115Q12893 351 aaPredicted RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 LAMB3Q13751 1172 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 ITGA9Q13797 1035 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 TUBB8Q3ZCM7 444 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 CEP68Q76N32 757 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 LPCAT2Q7L5N7 544 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 SPATA6LQ8N4H0 392 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 GPATCH11Q8N954 259 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 OR2I1PQ8NGU4 316 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 VPS39Q96JC1 886 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 VPS35Q96QK1 796 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 FAM167BQ9BTA0 163 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 ZDHHC3Q9NYG2 299 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 A0A1W2PPM1 405 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 PRAMEF26H0Y7S4 382 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 DLL1O00548 723 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 GSTA2P09210 222 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 CREB1P16220 341 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 OGNP20774 298 aaKnown RBP16.3■□□□□ 0.2
SHOX-201ENST00000334060 SIM2Q14190 667 aaPredicted RBP16.3■□□□□ 0.2
SHOX-201ENST00000334060 TCEAL6Q6IPX3 200 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 MRNIPQ6NTE8 343 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 CYS1Q717R9 158 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 RD3Q7Z3Z2 195 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 MZB1Q8WU39 189 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 TCEAL3Q969E4 200 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 COPS8Q99627 209 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 RBBP8Q99708 897 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 MOSPD1Q9UJG1 213 aa16.3■□□□□ 0.2
SHOX-201ENST00000334060 PHGDHO43175 533 aaKnown RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 NDUFS3O75489 264 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 SPAG6O75602 509 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 FZD2Q14332 565 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 TMED2Q15363 201 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 PPM1JQ5JR12 505 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 CEP85LQ5SZL2 805 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 LYSMD4Q5XG99 296 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 ENPP7Q6UWV6 458 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 TMEM207Q6UWW9 146 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 SLC36A4Q6YBV0 504 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 C11orf96Q7Z7L8 435 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 PHYKPLQ8IUZ5 450 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 DCLK2Q8N568 766 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 ASB12Q8WXK4 309 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 DNASE2BQ8WZ79 361 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 PIGKQ92643 395 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 RUVBL2Q9Y230 463 aaKnown RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 A0A1B0GVT2 93 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 GOLGA8RI6L899 631 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 CDK14O94921 469 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 ITGA2BP08514 1039 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 CD151P48509 253 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 EIF2B5Q13144 721 aaKnown RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 STAT4Q14765 748 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 ZNF528Q3MIS6 628 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 GPR33Q49SQ1 333 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 FAM83HQ6ZRV2 1179 aaPredicted RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 CEP128Q6ZU80 1094 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 SIDT2Q8NBJ9 832 aaKnown RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 C12orf65Q9H3J6 166 aaKnown RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 SARS2Q9NP81 518 aaKnown RBP16.29■□□□□ 0.2
SHOX-201ENST00000334060 GPR27Q9NS67 375 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 SUFUQ9UMX1 484 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 FANCMQ8IYD8 2048 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 LRP4O75096 1905 aa16.29■□□□□ 0.2
SHOX-201ENST00000334060 ADAMTS9Q9P2N4 1935 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms