RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ATXN1LP0C7T5 689 aaKnown RBP15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PDE12Q6L8Q7 609 aaKnown RBP15.74■□□□□ 0.11
PDGFB-201ENST00000331163 NCEH1Q6PIU2 408 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 RIPOR1Q6ZS17 1223 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 TMPRSS6Q8IU80 811 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 OR2A12Q8NGT7 310 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 SLC26A7Q8TE54 656 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 ZNF599Q96NL3 588 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 P2RY13Q9BPV8 354 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 ATG10Q9H0Y0 220 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 DNTTP04053 509 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 CHRNGP07510 517 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 GABRB3P28472 473 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 OCRLQ01968 901 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 RASA2Q15283 850 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 ATP13A5Q4VNC0 1218 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 ZNF542PQ5EBM4 170 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 POU5F2Q8N7G0 328 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 ENDOVQ8N8Q3 282 aaKnown RBP15.74■□□□□ 0.11
PDGFB-201ENST00000331163 OR2AG1Q9H205 316 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 HSFX1Q9UBD0 423 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PACSIN3Q9UKS6 424 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PLLPQ9Y342 182 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 FFAR2O15552 330 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PRKCHP24723 683 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 CDKN2DP55273 166 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 SEMA3AQ14563 771 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 CCDC157Q569K6 752 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 TXNDC11Q6PKC3 985 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 LAYNQ6UX15 382 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PRR23CQ6ZRP0 262 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 ARMCX6Q7L4S7 300 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 CILP2Q8IUL8 1156 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PTGR2Q8N8N7 351 aaPredicted RBP15.74■□□□□ 0.11
PDGFB-201ENST00000331163 BANPQ8N9N5 519 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 TRPC4APQ8TEL6 797 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 VCX3BQ9H321 246 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 VCX3AQ9NNX9 186 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 PRDM6Q9NQX0 595 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 DZANK1Q9NVP4 752 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 WWOXQ9NZC7 414 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 LGALS13Q9UHV8 139 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 CA5BQ9Y2D0 317 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 SEC16AO15027 2179 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 WASH4PA8MWX3 477 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 CDC7O00311 574 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 PRMT5O14744 637 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 SLC1A6P48664 564 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 TAF1AQ15573 450 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 CNPY1Q3B7I2 92 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 GRAMD1BQ3KR37 738 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 INO80DQ53TQ3 878 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ANKRD27Q96NW4 1050 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 MFSD1Q9H3U5 465 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 DDX18Q9NVP1 670 aaKnown RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 PKD2L2Q9NZM6 624 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 DOCK8Q8NF50 2099 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 TMEM233B4DJY2 109 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 NARSO43776 548 aaKnown RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ZMPSTE24O75844 475 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 PKMP14618 531 aaKnown RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 GDF5P43026 501 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 GRIA4P48058 902 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 Q6ZNB5 142 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 FAM81AQ8TBF8 368 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 WDR55Q9H6Y2 383 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 NSMCE4AQ9NXX6 385 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ANGPTL2Q9UKU9 493 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 FNDC1Q4ZHG4 1894 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 A0A0J9YYE9 177 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ITM2AO43736 263 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 TRBC1P01850 177 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 RFTN1Q14699 578 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 KIF19Q2TAC6 998 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 SH2D4BQ5SQS7 431 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 CLEC6AQ6EIG7 209 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 KIAA0930Q6ICG6 404 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 CHST15Q7LFX5 561 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ADIPOR2Q86V24 386 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ZSWIM9Q86XI8 627 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 RGL4Q8IZJ4 473 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 PCDH20Q8N6Y1 951 aaKnown RBP15.73■□□□□ 0.11
PDGFB-201ENST00000331163 GPR26Q8NDV2 337 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ANKRD49Q8WVL7 239 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 TMEM165Q9HC07 324 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 CD207Q9UJ71 328 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 BTRCQ9Y297 605 aa15.73■□□□□ 0.11
PDGFB-201ENST00000331163 ANKRD33BA6NCL7 494 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 C1QTNF3-AMACRE9PGA6 284 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 HNRNPRO43390 633 aaKnown RBP15.72■□□□□ 0.11
PDGFB-201ENST00000331163 OR6B1O95007 311 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 PRLP01236 227 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 BPIP17213 487 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 SPAM1P38567 509 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 PREPP48147 710 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 TTPAP49638 278 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 IL2P60568 153 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 EIF4EBP2Q13542 120 aaPredicted RBP15.72■□□□□ 0.11
PDGFB-201ENST00000331163 GTF2H3Q13889 308 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 TBC1D25Q3MII6 688 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms