RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZDHHC20Q5W0Z9 365 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 CRTC1Q6UUV9 634 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 ENPP7Q6UWV6 458 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 RBM44Q6ZP01 1051 aaKnown RBP6.3□□□□□ -1.4
SMG1-201ENST00000330588 HSD11B1LQ7Z5J1 315 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 WFDC3Q8IUB2 231 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 HID1Q8IV36 788 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 SLC35F3Q8IY50 421 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 RBFAQ8N0V3 343 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 PAF1Q8N7H5 531 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 AVL9Q8NBF6 648 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 NETO2Q8NC67 525 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 PLA2G15Q8NCC3 412 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 AGBL5Q8NDL9 886 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 EXD1Q8NHP7 514 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 MAPK15Q8TD08 544 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 OR1E3Q8WZA6 343 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 GAL3ST3Q96A11 431 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 IMP4Q96G21 291 aaKnown RBP6.3□□□□□ -1.4
SMG1-201ENST00000330588 COX14Q96I36 57 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 PPP1R2P1Q96PQ5 205 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 TRIB3Q96RU7 358 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 DPYSL5Q9BPU6 564 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 ABCG4Q9H172 646 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 SLC25A51Q9H1U9 297 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 POLR1BQ9H9Y6 1135 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 PCDH9Q9HC56 1237 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 MAGEE1Q9HCI5 957 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 FGF22Q9HCT0 170 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMG1-201ENST00000330588 PKD2L2Q9NZM6 624 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 IMPACTQ9P2X3 320 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 OR1A2Q9Y585 309 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
SMG1-201ENST00000330588 MYLKQ15746 1914 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CCDC66A2RUB6 948 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TMEM202A6NGA9 273 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ANKRD66B4E2M5 251 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 PJA2O43164 708 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 KRT37O76014 449 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ZRANB2O95218 330 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMG1-201ENST00000330588 NDUFA10O95299 355 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 IPO7O95373 1038 aaKnown RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 SOD1P00441 154 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CEACAM5P06731 702 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 MMP2P08253 660 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 PDHA1P08559 390 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CCKBRP32239 447 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CTNNA1P35221 906 aaKnown RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 GPR3P46089 330 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 MAXP61244 160 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 DSC2Q02487 901 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 NIPAL4Q0D2K0 466 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ILF3Q12906 894 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMG1-201ENST00000330588 HLTFQ14527 1009 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMG1-201ENST00000330588 CDKN3Q16667 212 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ISXQ2M1V0 245 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 C14orf28Q4W4Y0 310 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TEX44Q53QW1 395 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ZNF542PQ5EBM4 170 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ZFYVE27Q5T4F4 411 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 HENMT1Q5T8I9 393 aaKnown RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 LRRC66Q68CR7 880 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 GUSBP11Q6P575 273 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 Q6ZVL8 140 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 BBS12Q6ZW61 710 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 EFL1Q7Z2Z2 1120 aaKnown RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 CLEC14AQ86T13 490 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 NT5DC3Q86UY8 548 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 HEATR4Q86WZ0 1026 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CPNE8Q86YQ8 564 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CNTD1Q8N815 330 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 KYQ8NBH2 561 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CCNYQ8ND76 341 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 PDCD6IPQ8WUM4 868 aaKnown RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 TFB1MQ8WVM0 346 aaKnown RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 FGF11Q92914 225 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 PDXPQ96GD0 296 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 HIC2Q96JB3 615 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TEKT5Q96M29 485 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 MLPHQ9BV36 600 aaPredicted RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 TGIF2Q9GZN2 237 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ABCG8Q9H221 673 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TCEAL2Q9H3H9 227 aaPredicted RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 ACBD3Q9H3P7 528 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TRABDQ9H4I3 376 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ACSL6Q9UKU0 697 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 TRHDEQ9UKU6 1024 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 GPR34Q9UPC5 381 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 PCDHA13Q9Y5I0 950 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 ALG6Q9Y672 507 aa6.29□□□□□ -1.4
SMG1-201ENST00000330588 EPN1Q9Y6I3 576 aaPredicted RBP6.29□□□□□ -1.4
SMG1-201ENST00000330588 hCG_1818297A0A087WSY0 165 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 CCDC187A0A096LP49 1063 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 FAM149AA5PLN7 773 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms