RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 C2CD6Q53TS8 623 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DCST1Q5T197 706 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RPL13AP3Q6NVV1 102 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MAMDC4Q6UXC1 1216 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC69Q6ZNQ3 347 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MARK2Q7KZI7 788 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CHST15Q7LFX5 561 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 STK32CQ86UX6 486 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TBC1D21Q8IYX1 336 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PCED1BQ96HM7 432 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SNX27Q96L92 541 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PRDM12Q9H4Q4 367 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 WDR26Q9H7D7 661 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 EURLQ9NYK6 297 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MARK1Q9P0L2 795 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CFAP97Q9P2B7 532 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 HEY2Q9UBP5 337 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 IL36AQ9UHA7 158 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 C5P01031 1676 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 KMOO15229 486 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ENDOD1O94919 500 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 UROSP10746 265 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 HOXB2P14652 356 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TCF4P15884 667 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 EPORP19235 508 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ITIH1P19827 911 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MYL9P24844 172 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 XIAPP98170 497 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 BTKQ06187 659 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DPYSQ14117 519 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MAPK14Q16539 360 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZC3H12AQ5D1E8 599 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 FGD3Q5JSP0 725 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CPTPQ5TA50 214 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF571Q7Z3V5 609 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ECHDC2Q86YB7 292 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NRSN1Q8IZ57 195 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 EMC1Q8N766 993 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF513Q8N8E2 541 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 OR5L2Q8NGL0 311 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF473Q8WTR7 871 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 C1orf50Q9BV19 199 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DSN1Q9H410 356 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NXF3Q9H4D5 531 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MGAT4AQ9UM21 535 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ERVK-11Q9UQG0 969 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SCML2Q9UQR0 700 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 COQ4Q9Y3A0 265 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SCN9AQ15858 1988 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MTCL1Q9Y4B5 1905 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 A0A087WXM4 84 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 A0A1W2PQ45 241 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 A0A1W2PQY0 241 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 UBE2QL1A1L167 161 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NCF1BA6NI72 391 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NCF1CA8MVU1 366 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 E9PAM4 449 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 B3GALT2O43825 422 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF623O75123 536 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PAPSS2O95340 614 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 JMJD7P0C870 316 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RARAP10276 462 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CDK4P11802 303 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NCF1P14598 390 aaPredicted RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 AMPD1P23109 780 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SLC7A1P30825 629 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ARL2P36404 184 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CRATP43155 626 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 KCNJ1P48048 391 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NOMO3P69849 1222 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PSPHP78330 225 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MC1RQ01726 317 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CBX3Q13185 183 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ORC1Q13415 861 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ITPRIPL2Q3MIP1 535 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 CEP78Q5JTW2 689 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 KIAA0319Q5VV43 1072 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SLC8B1Q6J4K2 584 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 VITQ6UXI7 678 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF852Q6ZMS4 543 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ATCAYQ86WG3 371 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ALLCQ8N6M5 410 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PNLDC1Q8NA58 520 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DDHD1Q8NEL9 900 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 DDX1Q92499 740 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 HAS1Q92839 578 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ROPN1LQ96C74 230 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SRMSQ9H3Y6 488 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 EVA1AQ9H8M9 152 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 VRTNQ9H8Y1 702 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 IGSF9Q9P2J2 1179 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 NCDNQ9UBB6 729 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 KLQ9UEF7 1012 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 A0A087WWV3 80 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 LOC100653049A0A140TA62 436 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ESYT3A0FGR9 886 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 BLACEA4D250 179 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 SCDO00767 359 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PGRMC2O15173 223 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms