RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CDK14O94921 469 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 THPOP40225 353 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 DPYSQ14117 519 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 OVOS1Q6IE37 1185 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 PAQR9Q6ZVX9 377 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 CHERPQ8IWX8 916 aaKnown RBP14.46□□□□□ -0.09
PTPN9-201ENST00000306726 Q8N9G6 341 aaPredicted RBP14.46□□□□□ -0.09
PTPN9-201ENST00000306726 SMYD1Q8NB12 490 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 C3orf58Q8NDZ4 430 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 SPATA17Q96L03 361 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 TOX2Q96NM4 488 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 MKS1Q9NXB0 559 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 ORC6Q9Y5N6 252 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 CORINQ9Y5Q5 1042 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 MTSS1O43312 755 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 CYP7B1O75881 506 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 DARSP14868 501 aaKnown RBP14.46□□□□□ -0.09
PTPN9-201ENST00000306726 VBP1P61758 197 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 MRPS6P82932 125 aaKnown RBP14.46□□□□□ -0.09
PTPN9-201ENST00000306726 PLD3Q8IV08 490 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 OR7D4Q8NG98 312 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 CNIH3Q8TBE1 160 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 TPD52L3Q96J77 140 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 ZNF696Q9H7X3 374 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 KIF17Q9P2E2 1029 aa14.46□□□□□ -0.09
PTPN9-201ENST00000306726 PNMA8CA0A1B0GUJ8 204 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 H3BMQ9 156 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 S100BP04271 92 aaPredicted RBP14.46□□□□□ -0.1
PTPN9-201ENST00000306726 MATN1P21941 496 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 MAP2K4P45985 399 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 PTGR1Q14914 329 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 R3HCC1LQ7Z5L2 792 aaKnown RBP14.46□□□□□ -0.1
PTPN9-201ENST00000306726 ITIH5Q86UX2 942 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 SLC44A2Q8IWA5 706 aaPredicted RBP14.46□□□□□ -0.1
PTPN9-201ENST00000306726 TAMM41Q96BW9 452 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 COG8Q96MW5 612 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 TSSK3Q96PN8 268 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 TMLHEQ9NVH6 421 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 SIP14410 1827 aa14.46□□□□□ -0.1
PTPN9-201ENST00000306726 KRT87PA6NCN2 255 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 A8MV72 311 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CD3EAPO15446 510 aaKnown RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 RECQL5O94762 991 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CPSF4O95639 269 aaKnown RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 IL1BP01584 269 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 MYCLP1P12525 358 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 TGFBR1P36897 503 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 MASP1P48740 699 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CLCQ05315 142 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 SLC13A2Q13183 592 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 OR4D1Q15615 310 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 PKDCCQ504Y2 493 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 LRRC73Q5JTD7 316 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 FAM26DQ5JW98 314 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 PAGE2Q7Z2X7 111 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 FUNDC1Q8IVP5 155 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CLDN19Q8N6F1 224 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 TMBIM1Q969X1 311 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 WDR6Q9NNW5 1121 aaKnown RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 SYNDIG1LA6NDD5 238 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 hCG_2039718K7EN88 272 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ZSCAN9O15535 394 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ITGB1P05556 798 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ATP5BP06576 529 aaKnown RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 POU1F1P28069 291 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 PRDX6P30041 224 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ARHGEF7Q14155 803 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 GTDC1Q4AE62 458 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 OTUD1Q5VV17 481 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 OR52B6Q8NGF0 335 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ZNF419Q96HQ0 510 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 COX4I2Q96KJ9 171 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CCDC28BQ9BUN5 200 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 RAD21L1Q9H4I0 556 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 NSMCE4AQ9NXX6 385 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ATP11BQ9Y2G3 1177 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 RGS5O15539 181 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 TPTEP56180 551 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 NEK10Q6ZWH5 1172 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ERMP1Q7Z2K6 904 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CPSF7Q8N684 471 aaKnown RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 CALML6Q8TD86 181 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 BIRC7Q96CA5 298 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 TSPAN18Q96SJ8 248 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 HNRNPABQ99729 332 aaKnown RBP14.45□□□□□ -0.1
PTPN9-201ENST00000306726 BDH2Q9BUT1 245 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ST3GAL5Q9UNP4 418 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 ZNF451Q9Y4E5 1061 aa14.45□□□□□ -0.1
PTPN9-201ENST00000306726 NCAM2O15394 837 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 SEC22BO75396 215 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 SLC22A3O75751 556 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 NAB1Q13506 487 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 LRP8Q14114 963 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 ADRM1Q16186 407 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 UNC50Q53HI1 259 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 MRNIPQ6NTE8 343 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 LRRC52Q8N7C0 313 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 ZMIZ2Q8NF64 920 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 SMARCD1Q96GM5 515 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 CENPNQ96H22 339 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms