RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 STRA6Q9BX79 667 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ERVK-18Q9QC07 812 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 CAPN14A8MX76 684 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 MT-ND1P03886 318 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RIN1Q13671 783 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RANBP3LQ86VV4 465 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SPPL2CQ8IUH8 684 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 DNAAF1Q8NEP3 725 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 OR2T12Q8NG77 320 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CELF1Q92879 486 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 MARCH2Q9P0N8 246 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 NOP16Q9Y3C1 178 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 BCAS1O75363 584 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SLC25A27O95847 323 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF135P52742 658 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 DPYSL3Q14195 570 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 FAM151BQ6UXP7 276 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 FAM92BQ6ZTR7 304 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 KCTD9Q7L273 389 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 OXR1Q8N573 874 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SLC37A4O43826 429 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 PPIBP23284 216 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 GET4Q7L5D6 327 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CD247P20963 164 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ACVR2AP27037 513 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 LAMTOR4Q0VGL1 99 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SCARF1Q14162 830 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 GK5Q6ZS86 529 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SLC22A8Q8TCC7 542 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 OSMRQ99650 979 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 GDAP2Q9NXN4 497 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 TNFRSF11BO00300 401 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 VARSP26640 1264 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 POP5Q969H6 163 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ASF1AQ9Y294 204 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 EVPLQ92817 2033 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CHADO15335 359 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 HSD11B1P28845 292 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SF1Q15637 639 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ATXN7L2Q5T6C5 722 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 MYOCQ99972 504 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ETNK2Q9NVF9 386 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 EFCAB9A8MZ26 197 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 AIPO00170 330 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 GIT2Q14161 759 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RFTN2Q52LD8 501 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 FAM124AQ86V42 546 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF280BQ86YH2 543 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CRYBG2Q8N1P7 616 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ZMIZ2Q8NF64 920 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SCGB1C1Q8TD33 95 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 UXTQ9UBK9 157 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 WDR37Q9Y2I8 494 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CIB4A0PJX0 185 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 MPZL2O60487 215 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RP2O75695 350 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 CETPP11597 493 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 POU2F1P14859 743 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RAB39AQ14964 217 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 TIGD2Q4W5G0 525 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF484Q5JVG2 852 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RBM20Q5T481 1227 aaKnown RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 SLC2A14Q8TDB8 520 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 ADAMTS15Q8TE58 950 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 POLR3BQ9NW08 1133 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-201ENST00000306085 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
TRIM56-201ENST00000306085 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 RPS9P46781 194 aaKnown RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CDH11P55287 796 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ADAMTSL2Q86TH1 951 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.29□□□□□ -0.283e-6■■■■■ 101
TRIM56-201ENST00000306085 C7orf57Q8NEG2 295 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 QRICH2Q9H0J4 1663 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF132P52740 706 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SLC5A3P53794 718 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SLC9B1Q4ZJI4 515 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 HFE2Q6ZVN8 426 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SMARCD2Q92925 531 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ARMC5Q96C12 935 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TM9SF3Q9HD45 589 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 PLGP00747 810 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 PIRTP0C851 137 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ACSL1P33121 698 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CCR10P46092 362 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 METTL21AQ8WXB1 218 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 HSPA12BQ96MM6 686 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TAS2R3Q9NYW6 316 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TRPS1Q9UHF7 1281 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CLDN4O14493 209 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms