RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 DNAJC15Q9Y5T4 150 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 KRT36O76013 467 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ASLP04424 464 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 SRPRAP08240 638 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CEBPBP17676 345 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 EN2P19622 333 aaPredicted RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 NSG1P42857 185 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 RECQLP46063 649 aaPredicted RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 MRPL19P49406 292 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 HK3P52790 923 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 NTHL1P78549 312 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 SLC34A1Q06495 639 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 STX5Q13190 355 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 RCN1Q15293 331 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 PCBP2Q15366 365 aaKnown RBP eCLIP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 LRRC66Q68CR7 880 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CLEC6AQ6EIG7 209 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 TSPAN33Q86UF1 283 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 C7orf61Q8IZ16 206 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 OR56A4Q8NGH8 313 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 TRPC4APQ8TEL6 797 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 TWIST2Q8WVJ9 160 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ASIC4Q96FT7 647 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 LRIG1Q96JA1 1093 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 TACO1Q9BSH4 297 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CIPCQ9C0C6 399 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 BRD9Q9H8M2 597 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 SLCO3A1Q9UIG8 710 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ANGPTL2Q9UKU9 493 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 BPTFQ12830 3046 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 GPR39O43194 453 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ESRRBO95718 433 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CBSLP0DN79 551 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CHRM1P11229 460 aaPredicted RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CYP2A6P11509 494 aaPredicted RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CBSP35520 551 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 NNMTP40261 264 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 NUDT2P50583 147 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 PKNOX1P55347 436 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 TGFBIQ15582 683 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 TTLL9Q3SXZ7 439 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CMPK2Q5EBM0 449 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 METTL2BQ6P1Q9 378 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ADGRG6Q86SQ4 1221 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 DSELQ8IZU8 1212 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 MYO1HQ8N1T3 1032 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 PDPRQ8NCN5 879 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 GPR26Q8NDV2 337 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 OR2A12Q8NGT7 310 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 FRS2Q8WU20 508 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 MRGPRX3Q96LB0 322 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 ZSWIM3Q96MP5 696 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 NSUN5Q96P11 429 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 HEPHQ9BQS7 1158 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 RAD18Q9NS91 495 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 CD274Q9NZQ7 290 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 NFKBIL1Q9UBC1 381 aaPredicted RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 G3BP2Q9UN86 482 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 SLC8A2Q9UPR5 921 aa19.2■□□□□ 0.66
HOXC4-201ENST00000303406 MRPS23Q9Y3D9 190 aaKnown RBP19.2■□□□□ 0.66
HOXC4-201ENST00000303406 IGLV3-16A0A075B6K0 115 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 LRRC14BA6NHZ5 514 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 H0Y3Z8 333 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 PSMD12O00232 456 aaPredicted RBP19.19■□□□□ 0.66
HOXC4-201ENST00000303406 AIM2O14862 343 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 RAD51BO15315 384 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 HOXC11O43248 304 aaPredicted RBP19.19■□□□□ 0.66
HOXC4-201ENST00000303406 CSPG5O95196 566 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 S100BP04271 92 aaPredicted RBP19.19■□□□□ 0.66
HOXC4-201ENST00000303406 UGT2B4P06133 528 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 C1SP09871 688 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 UROSP10746 265 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 TSPAN8P19075 237 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 LHCGRP22888 699 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 CA5AP35218 305 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 AP2B1P63010 937 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 PTSQ03393 145 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 CCDC6Q16204 474 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 GPRC6AQ5T6X5 926 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 Q6ZVU0 165 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 PHYKPLQ8IUZ5 450 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 ZBTB2Q8N680 514 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 RCN3Q96D15 328 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 DOCK6Q96HP0 2047 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 ZNF382Q96SR6 550 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 BOCQ9BWV1 1114 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 SARS2Q9NP81 518 aaKnown RBP19.19■□□□□ 0.66
HOXC4-201ENST00000303406 SPATS2LQ9NUQ6 558 aaKnown RBP19.19■□□□□ 0.66
HOXC4-201ENST00000303406 PKD2L2Q9NZM6 624 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 OARD1Q9Y530 152 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 HCFC2Q9Y5Z7 792 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 WNT6Q9Y6F9 365 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 PRSS21Q9Y6M0 314 aa19.19■□□□□ 0.66
HOXC4-201ENST00000303406 IQCF5A8MTL0 148 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 SLC25A14O95258 325 aaPredicted RBP19.18■□□□□ 0.66
HOXC4-201ENST00000303406 UGT1A6P19224 532 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 UGT1A1P22309 533 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 UGT1A4P22310 534 aa19.18■□□□□ 0.66
HOXC4-201ENST00000303406 UGT1A3P35503 534 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms