RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PLIN3O60664 434 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 VPS26AO75436 327 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PYGLP06737 847 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3HP0C7X1 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 ATP1B2P14415 290 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 ZNF37AP17032 561 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 ACSL1P33121 698 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 GPR1P46091 355 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 RPS9P46781 194 aaKnown RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3GQ6DHY5 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PTRHD1Q6GMV3 140 aaKnown RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3CQ6IPX1 549 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PNCKQ6P2M8 343 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D3Q8IZP1 549 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PLA2G15Q8NCC3 412 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 ASB12Q8WXK4 309 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SLC30A3Q99726 388 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SLC17A9Q9BYT1 436 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 DHRS7Q9Y394 339 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SGTAO43765 313 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SLC25A14O95258 325 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PAK4O96013 591 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 CHRM3P20309 590 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 ZXDAP98168 799 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PDAP1Q13442 181 aaKnown RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 RAET1GQ6H3X3 334 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 PAQR3Q6TCH7 311 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 ADAMTSL4Q6UY14 1074 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TBC1D1Q86TI0 1168 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 FAM124AQ86V42 546 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 TP53I13Q8NBR0 393 aaPredicted RBP24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 GIMAP7Q8NHV1 300 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 CD200R1Q8TD46 325 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 FAM136AQ96C01 138 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 CCDC134Q9H6E4 229 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SGK2Q9HBY8 427 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SYTL2Q9HCH5 934 aa24.34■■□□□ 1.49
GTF2A1-201ENST00000298173 SHOX2O60902 331 aaPredicted RBP24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 MTX2O75431 263 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 PROCP04070 461 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 CCDC166P0CW27 439 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 TEAD1P28347 426 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 SEPT7Q16181 437 aaKnown RBP24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 CCDC153Q494R4 210 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 HHATQ5VTY9 493 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 UGT3A1Q6NUS8 523 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 SPEM1Q8N4L4 309 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 ARMC2Q8NEN0 867 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 GDAP1Q8TB36 358 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 CKAP2Q8WWK9 683 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 BTBD1Q9H0C5 482 aa24.33■■□□□ 1.49
GTF2A1-201ENST00000298173 INPP4BO15327 924 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 AP2A2O94973 939 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 LTA4HP09960 611 aaKnown RBP24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 TMEM115Q12893 351 aaPredicted RBP24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 CSHL1Q14406 222 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 TSNAXIP1Q2TAA8 658 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 ZNF648Q5T619 568 aaPredicted RBP24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 PHYKPLQ8IUZ5 450 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 SPATA6LQ8N4H0 392 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 SIDT2Q8NBJ9 832 aaKnown RBP24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 TSTD1Q8NFU3 115 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 OR2T34Q8NGX1 318 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 LKAAEAR1Q8TD35 194 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 DCUN1D1Q96GG9 259 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 COX14Q96I36 57 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 NMRAL1Q9HBL8 299 aa24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 MBNL1Q9NR56 388 aaKnown RBP24.32■■□□□ 1.48
GTF2A1-201ENST00000298173 CFAP99D6REC4 459 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 E5RI56 91 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 RALBP11234 206 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 MSH3P20585 1137 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 TRIM23P36406 574 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 PPP2CBP62714 309 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 PPP2CAP67775 309 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 IL9RQ01113 521 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 SGCGQ13326 291 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 FAM83EQ2M2I3 478 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 ANO7Q6IWH7 933 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 TRIM69Q86WT6 500 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 PGBD3Q8N328 593 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 SGF29Q96ES7 293 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 TRMT6Q9UJA5 497 aaKnown RBP24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 SIT1Q9Y3P8 196 aa24.31■■□□□ 1.48
GTF2A1-201ENST00000298173 PRR23AA6NEV1 266 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 TARM1B6A8C7 271 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 TSPAN12O95859 305 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 SBK3P0C264 359 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 OR56A5P0C7T3 313 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 AKT1P31749 480 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 SERPINB4P48594 390 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 GNGT1P63211 74 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 AGAP9Q5VTM2 703 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 FSTL5Q8N475 847 aaPredicted RBP24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 RASGEF1AQ8N9B8 481 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 KLK6Q92876 244 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 LENG8Q96PV6 779 aaPredicted RBP24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 HHIPQ96QV1 700 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 PAIP2Q9BPZ3 127 aaKnown RBP24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 TRIM39Q9HCM9 518 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms