RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 FAM163BP0C2L3 166 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 CLCQ05315 142 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 VEPH1Q14D04 833 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 FAM26DQ5JW98 314 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 C6orf10Q5SRN2 563 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 OTUD3Q5T2D3 398 aaPredicted RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 KLHDC10Q6PID8 442 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 CBR4Q8N4T8 237 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 GABPB2Q8TAK5 448 aaPredicted RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ASB9Q96DX5 294 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ASIC4Q96FT7 647 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 PPM1MQ96MI6 270 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 FEM1AQ9BSK4 669 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ZDHHC6Q9H6R6 413 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ABCB8Q9NUT2 735 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 VPS4AQ9UN37 437 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 SOCS2O14508 198 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 CASQ2O14958 399 aaPredicted RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 SCAMP1O15126 338 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 CD160O95971 181 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 NEK2P51955 445 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 HK3P52790 923 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 DDX39BQ13838 428 aaKnown RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ARHGEF7Q14155 803 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 IKBKEQ14164 716 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 CXorf57Q6NSI4 855 aaKnown RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 ZFP1Q6P2D0 407 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 PELI3Q8N2H9 469 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 TMEM102Q8N9M5 508 aaPredicted RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 PAWRQ96IZ0 340 aaKnown RBP13.4□□□□□ -0.26
TTC39B-201ENST00000297615 HIC2Q96JB3 615 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 UBXN10Q96LJ8 280 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 DCUN1D5Q9BTE7 237 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 TBCDQ9BTW9 1192 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 MED16Q9Y2X0 877 aa13.4□□□□□ -0.26
TTC39B-201ENST00000297615 NME4O00746 187 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PRAMEF1O95521 474 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 FGF1P05230 155 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 UGT2B4P06133 528 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 LPOP22079 712 aaPredicted RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 OXTRP30559 389 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 YAP1P46937 504 aaKnown RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 TUFMP49411 452 aaKnown RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 CASP9P55211 416 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 HERVK_113P63132 956 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 NFYCQ13952 458 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 BOP1Q14137 746 aaKnown RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 ZIK1Q3SY52 487 aaPredicted RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 SETMARQ53H47 684 aaPredicted RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 IL27RAQ6UWB1 636 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 GAREM2Q75VX8 874 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 CLYBLQ8N0X4 340 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 FNDC5Q8NAU1 212 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 SCAMP4Q969E2 229 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 SLCO4A1Q96BD0 722 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 ERVK-6Q9BXR3 956 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 MEAF6Q9HAF1 191 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 VCX3AQ9NNX9 186 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PRSS51A0A1B0GVH4 220 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 DRGXA6NNA5 263 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 H3BNC9 293 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 H7C4K7 107 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PLK4O00444 970 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 LRATO95237 230 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 TNFAIP8O95379 198 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 URODP06132 367 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 CST5P28325 142 aaPredicted RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PCSK6P29122 969 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PBLDP30039 288 aaPredicted RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PLCL1Q15111 1095 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 CYP51A1Q16850 503 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 SLC22A9Q8IVM8 553 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 C2orf73Q8N5S3 287 aaPredicted RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 CCDC126Q96EE4 140 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 AARSD1Q9BTE6 412 aaKnown RBP13.39□□□□□ -0.27
TTC39B-201ENST00000297615 NDUFAF1Q9Y375 327 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 PKP3Q9Y446 797 aa13.39□□□□□ -0.27
TTC39B-201ENST00000297615 NEDD8-MDP1E9PL57 170 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 FKTNO75072 461 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 SLC25A14O95258 325 aaPredicted RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 GSNP06396 782 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CCL5P13501 91 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 SYN1P17600 705 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 RPL5P46777 297 aaKnown RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ZNF135P52742 658 aaPredicted RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 RAD51Q06609 339 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 MAPRE2Q15555 327 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 SYVN1Q86TM6 617 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 LCA5Q86VQ0 697 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 GPSM1Q86YR5 675 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 METTL6Q8TCB7 284 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms