RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SERPINB5P36952 375 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 SETDB1Q15047 1291 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 ATP13A5Q4VNC0 1218 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 MACC1Q6ZN28 852 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 PIWIL4Q7Z3Z4 852 aaKnown RBP15.39■□□□□ 0.05
LSM6-201ENST00000296581 HSD11B1LQ7Z5J1 315 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 GALNT15Q8N3T1 639 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 PIP4K2CQ8TBX8 421 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 LRRC37BQ96QE4 947 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 ATOH8Q96SQ7 321 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 TTYH1Q9H313 450 aaPredicted RBP15.39■□□□□ 0.05
LSM6-201ENST00000296581 RAD18Q9NS91 495 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 PNPOQ9NVS9 261 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 ZDHHC3Q9NYG2 299 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 DHRS7Q9Y394 339 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 PRSS21Q9Y6M0 314 aa15.39■□□□□ 0.05
LSM6-201ENST00000296581 IGLV3-16A0A075B6K0 115 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 RGSL1A5PLK6 1076 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 E5RI56 91 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 ANHXE9PGG2 379 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 IL12RB1P42701 662 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 AQP5P55064 265 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 HTR4Q13639 388 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 ADGRE1Q14246 886 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 OR4D1Q15615 310 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 PTRHD1Q6GMV3 140 aaKnown RBP15.38■□□□□ 0.05
LSM6-201ENST00000296581 ERAP2Q6P179 960 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 TRIM67Q6ZTA4 783 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 SUSD6Q92537 303 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 ARRDC3Q96B67 414 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 CDH19Q9H159 772 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 MYLK2Q9H1R3 596 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 STN1Q9H668 368 aaKnown RBP15.38■□□□□ 0.05
LSM6-201ENST00000296581 SMOXQ9NWM0 555 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 BLOC1S6Q9UL45 172 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 SLC12A4Q9UP95 1085 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 RAP2CQ9Y3L5 183 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 NUMBLQ9Y6R0 609 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 TICRRQ7Z2Z1 1910 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 IQCF5A8MTL0 148 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 ZNF195O14628 629 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 KERAO60938 352 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 APODP05090 189 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 GRIN2CQ14957 1233 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 LRIT3Q3SXY7 679 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 POM121L1PQ3SYA9 428 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 SPDYAQ5MJ70 313 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 RAVER1Q8IY67 606 aaKnown RBP15.38■□□□□ 0.05
LSM6-201ENST00000296581 LSMEM2Q8N112 164 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 ZNF781Q8N8C0 355 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 SKA1Q96BD8 255 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 ERP27Q96DN0 273 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 MOCOSQ96EN8 888 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 WWP1Q9H0M0 922 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 FAM83DQ9H4H8 585 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 NCKIPSDQ9NZQ3 722 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 HEY2Q9UBP5 337 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 SUN2Q9UH99 717 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 IKZF3Q9UKT9 509 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 PIKFYVEQ9Y2I7 2098 aa15.38■□□□□ 0.05
LSM6-201ENST00000296581 TMEM265A0A087WTH1 108 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 SPINT1O43278 529 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 DIAPH2O60879 1101 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 CHRNGP07510 517 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 HNRNPLP14866 589 aaKnown RBP eCLIP15.37■□□□□ 0.05
LSM6-201ENST00000296581 NSG1P42857 185 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 METAP1P53582 386 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 IL2P60568 153 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 BNIP1Q12981 228 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 ENPP2Q13822 863 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 ARL13AQ5H913 290 aaPredicted RBP15.37■□□□□ 0.05
LSM6-201ENST00000296581 EGFLAMQ63HQ2 1017 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 NUDT18Q6ZVK8 323 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 TECPR1Q7Z6L1 1165 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 STAG3L4Q8TBR4 150 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 L3HYPDHQ96EM0 354 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 PDLIM5Q96HC4 596 aaKnown RBP15.37■□□□□ 0.05
LSM6-201ENST00000296581 CNDP1Q96KN2 507 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 TMEM237Q96Q45 408 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 COPS8Q99627 209 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 ILKAPQ9H0C8 392 aaPredicted RBP15.37■□□□□ 0.05
LSM6-201ENST00000296581 ANTXRLA6NF34 631 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 PSMD11O00231 422 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 SMIM24O75264 130 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 TPBGLP0DKB5 382 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 MTHFD2P13995 350 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 HK2P52789 917 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 PRKAA1Q13131 559 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 LIPIQ6XZB0 460 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 Q6ZVL8 140 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 MAVSQ7Z434 540 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 MTDHQ86UE4 582 aaKnown RBP15.37■□□□□ 0.05
LSM6-201ENST00000296581 CPNE9Q8IYJ1 553 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 CLDN19Q8N6F1 224 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 CCNYL1Q8N7R7 359 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 LKAAEAR1Q8TD35 194 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 AGAP11Q8TF27 550 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 INPP5DQ92835 1189 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 LINGO1Q96FE5 620 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms