RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 NPAS2Q99743 824 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 NLNQ9BYT8 704 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 SMPD3Q9NY59 655 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 CCDC59Q9P031 241 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 MRPS7Q9Y2R9 242 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 NR2E1Q9Y466 385 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 G3V2T6 193 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 PLK4O00444 970 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 SIN3BO75182 1162 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 SLC22A3O75751 556 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAM183BPQ6ZVS7 135 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 PIK3C3Q8NEB9 887 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 OR2T12Q8NG77 320 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 AUTS2Q8WXX7 1259 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPR62Q9BZJ7 368 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 MTRRQ9UBK8 725 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 SGTAO43765 313 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 EDN1P05305 212 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 HNRNPLP14866 589 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TPSB2P20231 275 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TPSAB1Q15661 275 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 SLC39A12Q504Y0 691 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ARMC12Q5T9G4 340 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAM180AQ6UWF9 173 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ARMCX6Q7L4S7 300 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 RAB43Q86YS6 212 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 CDYL2Q8N8U2 506 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 CADM1Q9BY67 442 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TMEM165Q9HC07 324 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 PER2O15055 1255 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 RTN3O95197 1032 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 RPN2P04844 631 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPIP06744 558 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 C8AP07357 584 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 UMPSP11172 480 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 RPL38P63173 70 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ABATP80404 500 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 PTP4A2Q12974 167 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 NOMO1Q15155 1222 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TIGD2Q4W5G0 525 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ALKAL1Q6UXT8 129 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 RNF19BQ6ZMZ0 732 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 CAMKK1Q8N5S9 505 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 LRRC57Q8N9N7 239 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ANKRD52Q8NB46 1076 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 OR5B17Q8NGF7 314 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 CLPTM1LQ96KA5 538 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 UBE2ZQ9H832 354 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ASAH2Q9NR71 780 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ASB3Q9Y575 518 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TANC1Q9C0D5 1861 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPTLC1O15269 473 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 IGSF6O95976 241 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 CCNB1P14635 433 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 AFTPHQ6ULP2 937 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 OR52L1Q8NGH7 329 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAR1Q8WVX9 515 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 ITCHQ96J02 903 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 ACBD6Q9BR61 282 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 ADI1Q9BV57 179 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 WDR55Q9H6Y2 383 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 MOV10Q9HCE1 1003 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 ABCC13Q9NSE7 274 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 SAMD4AQ9UPU9 718 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 A0A0J9YYE9 177 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 C2orf71A6NGG8 1288 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 PIRO00625 290 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 UGT2B15P54855 530 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 MRPS5P82675 430 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 BCL2L1Q07817 233 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 FNBP1LQ5T0N5 605 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 GALNT18Q6P9A2 607 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 CXXC5Q7LFL8 322 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPATA19Q7Z5L4 167 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 CMC1Q7Z7K0 106 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 PEG10Q86TG7 708 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 CUZD1Q86UP6 607 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 LPGAT1Q92604 370 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 USP7Q93009 1102 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 RC3H2Q9HBD1 1191 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 NFKBIL1Q9UBC1 381 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 SLC12A4Q9UP95 1085 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 ENTPD4Q9Y227 616 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 BTRCQ9Y297 605 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAM240BA0A1B0GVZ2 78 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 GSAPA4D1B5 854 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 LSM1O15116 133 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 RGS10O43665 173 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 CYP7B1O75881 506 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 MYL9P24844 172 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 GMFBP60983 142 aa11.75□□□□□ -0.53
SYNGAP1-201ENST00000293748 MED22Q15528 200 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms