RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 ERAP2Q6P179 960 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 SERPINA13PQ6UXR4 307 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 Q6ZVL8 140 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 NAT14Q8WUY8 206 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 EXT2Q93063 718 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 MSLNLQ96KJ4 702 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 TUBB6Q9BUF5 446 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 TRMT61BQ9BVS5 477 aaKnown RBP21.82■■□□□ 1.08
CCDC7-201ENST00000277657 SHCBP1LQ9BZQ2 653 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 EML4Q9HC35 981 aaKnown RBP21.82■■□□□ 1.08
CCDC7-201ENST00000277657 LATS2Q9NRM7 1088 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 CD84Q9UIB8 345 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 SORCS3Q9UPU3 1222 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 PIKFYVEQ9Y2I7 2098 aa21.82■■□□□ 1.08
CCDC7-201ENST00000277657 CAPN14A8MX76 684 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 KLK8O60259 260 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 DIAPH2O60879 1101 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 SLC25A14O95258 325 aaPredicted RBP21.81■■□□□ 1.08
CCDC7-201ENST00000277657 GRIA2P42262 883 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 PFKFB4Q16877 469 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 GPRC6AQ5T6X5 926 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 HENMT1Q5T8I9 393 aaKnown RBP21.81■■□□□ 1.08
CCDC7-201ENST00000277657 TECPR1Q7Z6L1 1165 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 PIP4K2CQ8TBX8 421 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 CLDND1Q9NY35 253 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 SPINT1O43278 529 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 ETV3P41162 512 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 IL12RB1P42701 662 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 METAP1P53582 386 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 PREPLQ4J6C6 727 aaPredicted RBP21.81■■□□□ 1.08
CCDC7-201ENST00000277657 SLC9B1Q4ZJI4 515 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 LIPIQ6XZB0 460 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 SCAMP4Q969E2 229 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 ARRDC3Q96B67 414 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 KLHL29Q96CT2 875 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 PTCD3Q96EY7 689 aaKnown RBP21.81■■□□□ 1.08
CCDC7-201ENST00000277657 CCDC106Q9BWC9 280 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 SPATA16Q9BXB7 569 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 ARL8BQ9NVJ2 186 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 ARMCX1Q9P291 453 aa21.81■■□□□ 1.08
CCDC7-201ENST00000277657 CFAP73A6NFT4 308 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 SUPT3HB4E1H0 165 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 HNRNPCL1O60812 293 aaKnown RBP21.8■■□□□ 1.08
CCDC7-201ENST00000277657 SUPT3HO75486 399 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 SUPT7LO94864 414 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 GRIN2CQ14957 1233 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 COL19A1Q14993 1142 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 RPS27LQ71UM5 84 aaKnown RBP21.8■■□□□ 1.08
CCDC7-201ENST00000277657 RAB44Q7Z6P3 723 aaPredicted RBP21.8■■□□□ 1.08
CCDC7-201ENST00000277657 RAVER1Q8IY67 606 aaKnown RBP21.8■■□□□ 1.08
CCDC7-201ENST00000277657 TRAM1L1Q8N609 369 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 LRMDAQ9H2I8 198 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 ARHGEF3Q9NR81 526 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 SPATS2LQ9NUQ6 558 aaKnown RBP21.8■■□□□ 1.08
CCDC7-201ENST00000277657 KLHL42Q9P2K6 505 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 LNPEPQ9UIQ6 1025 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 TMCO1Q9UM00 188 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 TRIM33Q9UPN9 1127 aa21.8■■□□□ 1.08
CCDC7-201ENST00000277657 TNRC18O15417 2968 aaPredicted RBP21.8■■□□□ 1.08
CCDC7-201ENST00000277657 H0Y858 1186 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 PSMD11O00231 422 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 TRIM16O95361 564 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 GFAPP14136 432 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ALDH18A1P54886 795 aaKnown RBP21.79■■□□□ 1.08
CCDC7-201ENST00000277657 CRY1Q16526 586 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 SH2D4BQ5SQS7 431 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 CUZD1Q86UP6 607 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 MICALL1Q8N3F8 863 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 FBXO39Q8N4B4 442 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ZBTB2Q8N680 514 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 SUSD6Q92537 303 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 SLC7A6OSQ96CW6 309 aaPredicted RBP21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ANTXRLA6NF34 631 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 STX16-NPEPL1H3BU86 382 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 UBFD1O14562 309 aaKnown RBP21.79■■□□□ 1.08
CCDC7-201ENST00000277657 STX16O14662 325 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 SIX3O95343 332 aaPredicted RBP21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ELFN1P0C7U0 828 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 GM2AP17900 193 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ITGB6P18564 788 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 DGKAP23743 735 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 RGS4P49798 205 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 TBCCQ15814 346 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 METTL21CQ5VZV1 264 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 MTSS1LQ765P7 747 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 GPSM1Q86YR5 675 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 PPM1EQ8WY54 764 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 NSL1Q96IY1 281 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ASB2Q96Q27 587 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ZSCAN5AQ9BUG6 496 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 C1QTNF3Q9BXJ4 246 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 TNFRSF12AQ9NP84 129 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 EPS15L1Q9UBC2 864 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 ITM2BQ9Y287 266 aa21.79■■□□□ 1.08
CCDC7-201ENST00000277657 TMEM233B4DJY2 109 aa21.78■■□□□ 1.08
CCDC7-201ENST00000277657 AREL1O15033 823 aa21.78■■□□□ 1.08
CCDC7-201ENST00000277657 APODP05090 189 aa21.78■■□□□ 1.08
CCDC7-201ENST00000277657 HK3P52790 923 aa21.78■■□□□ 1.08
CCDC7-201ENST00000277657 EGFLAMQ63HQ2 1017 aa21.78■■□□□ 1.08
CCDC7-201ENST00000277657 TREML1Q86YW5 311 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms