RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 UGT1A6P19224 532 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 UGT1A1P22309 533 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 UGT1A4P22310 534 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 UGT1A3P35503 534 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 SPAM1P38567 509 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 MAPK10P53779 464 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 CLN3Q13286 438 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 NFATC2Q13469 925 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 PRPSAP1Q14558 356 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 CHRNA6Q15825 494 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 ZNF547Q8IVP9 402 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 RCBTB1Q8NDN9 531 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 OR10G6Q8NH81 332 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 GDAP1Q8TB36 358 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 USP7Q93009 1102 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 AHCYL2Q96HN2 611 aaKnown RBP15.85■□□□□ 0.13
USE1-201ENST00000263897 CCDC74BQ96LY2 380 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 SPATA13Q96N96 652 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 TIMM29Q9BSF4 260 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.85■□□□□ 0.13
USE1-201ENST00000263897 B3GNT4Q9C0J1 378 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 OSGEPL1Q9H4B0 414 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 STN1Q9H668 368 aaKnown RBP15.85■□□□□ 0.13
USE1-201ENST00000263897 UGT1A7Q9HAW7 530 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 UGT1A10Q9HAW8 530 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 UGT1A8Q9HAW9 530 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.85■□□□□ 0.13
USE1-201ENST00000263897 PDP2Q9P2J9 529 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 CPNE7Q9UBL6 633 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 PACSIN2Q9UNF0 486 aaPredicted RBP15.85■□□□□ 0.13
USE1-201ENST00000263897 PKP3Q9Y446 797 aa15.85■□□□□ 0.13
USE1-201ENST00000263897 PRAMEF33A0A0G2JMD5 474 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 GLYATL1P3A0A0U1RQE8 302 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 STX7O15400 261 aaKnown RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 DDX3YO15523 660 aaKnown RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 PRAMEF10O60809 474 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 ZNF189O75820 626 aaPredicted RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 FTCDO95954 541 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 CCL4P13236 92 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 MPSTP25325 297 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 PSMB4P28070 264 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 CSF2RBP32927 897 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 VAC14Q08AM6 782 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 TAF1AQ15573 450 aaPredicted RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 INSCQ1MX18 579 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 ARHGAP40Q5TG30 622 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 WDR74Q6RFH5 385 aaPredicted RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 FAM151BQ6UXP7 276 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 C11orf96Q7Z7L8 435 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 RNF10Q8N5U6 811 aaKnown RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 AVL9Q8NBF6 648 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 TTC13Q8NBP0 860 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 CCDC110Q8TBZ0 833 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 SNRNP27Q8WVK2 155 aaKnown RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 TTC25Q96NG3 672 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 TMEM9Q9P0T7 183 aa15.84■□□□□ 0.13
USE1-201ENST00000263897 SCHIP1Q9P0W5 487 aaPredicted RBP15.84■□□□□ 0.13
USE1-201ENST00000263897 MGAQ8IWI9 3026 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 GOLGA6L9A6NEM1 432 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 C5orf60A6NFR6 353 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 C2orf81A6NN90 581 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 C9orf172C9J069 976 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 GAPDHSO14556 408 aaPredicted RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 DUX1O43812 170 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 THRAP10827 490 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 FGF3P11487 239 aaPredicted RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 LPOP22079 712 aaPredicted RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 IDSP22304 550 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 CSTF2P33240 577 aaKnown RBP eCLIP15.83■□□□□ 0.12
USE1-201ENST00000263897 CA5AP35218 305 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 EPHA4P54764 986 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 UBE2IP63279 158 aaKnown RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 MSLNQ13421 630 aaPredicted RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 OLIG2Q13516 323 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 ITGA9Q13797 1035 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 GTF2H3Q13889 308 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 PTPRCAPQ14761 206 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 PLA2G4EQ3MJ16 856 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 LDLRAP1Q5SW96 308 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 TMEM164Q5U3C3 297 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 ABRAXAS1Q6UWZ7 409 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 WASH2PQ6VEQ5 465 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 AGBL5Q8NDL9 886 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 ZNF398Q8TD17 642 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 HES6Q96HZ4 224 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 PPP1R2P1Q96PQ5 205 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 TAAR9Q96RI9 348 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 CCNL2Q96S94 520 aaPredicted RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 APOL2Q9BQE5 337 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 WASH6PQ9NQA3 447 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 ZNF624Q9P2J8 865 aaPredicted RBP15.83■□□□□ 0.12
USE1-201ENST00000263897 DNAJC16Q9Y2G8 782 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 ARL5AQ9Y689 179 aa15.83■□□□□ 0.12
USE1-201ENST00000263897 K7ENP7 123 aa15.82■□□□□ 0.12
USE1-201ENST00000263897 ATXN7O15265 892 aaPredicted RBP15.82■□□□□ 0.12
USE1-201ENST00000263897 KCNJ13O60928 360 aa15.82■□□□□ 0.12
USE1-201ENST00000263897 PTMAP06454 111 aaKnown RBP15.82■□□□□ 0.12
USE1-201ENST00000263897 SLC19A1P41440 591 aa15.82■□□□□ 0.12
USE1-201ENST00000263897 PPM1FP49593 454 aaPredicted RBP15.82■□□□□ 0.12
USE1-201ENST00000263897 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms