RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TRIM16O95361 564 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 NR4A1P22736 598 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 PSMD8P48556 350 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 POLR2JP52435 117 aaKnown RBP8.21□□□□□ -1.1
CDC27-201ENST00000066544 YBEYP58557 167 aaPredicted RBP8.21□□□□□ -1.1
CDC27-201ENST00000066544 IL2P60568 153 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 C6orf136Q5SQH8 315 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 TBPL2Q6SJ96 375 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 PDZD8Q8NEN9 1154 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 TRPV3Q8NET8 790 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 RNF217Q8TC41 542 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 TOP1MTQ969P6 601 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 EGFL8Q99944 293 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 ACTR3BQ9P1U1 418 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 POLR3HQ9Y535 204 aaPredicted RBP8.21□□□□□ -1.1
CDC27-201ENST00000066544 SQORQ9Y6N5 450 aa8.21□□□□□ -1.1
CDC27-201ENST00000066544 G6PDP11413 515 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 BMP2P12643 396 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 GKP32189 559 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FKBP1BP68106 108 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 RNF219Q5W0B1 726 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 LETMD1Q6P1Q0 360 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 STK32CQ86UX6 486 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 RASAL3Q86YV0 1011 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FAM126BQ8IXS8 530 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 DHRSXQ8N5I4 330 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 WBP2Q969T9 261 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 MTFMTQ96DP5 389 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 CHID1Q9BWS9 393 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ZNHIT2Q9UHR6 403 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 IGLV3-10A0A075B6K4 115 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 INSIG1O15503 277 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 PRLP01236 227 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FGF4P08620 206 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 LPOP22079 712 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 HSPA7P48741 367 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ERVPABLB-1P60509 514 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 LAPTM5Q13571 262 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ANKRD34AQ69YU3 496 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FAM151BQ6UXP7 276 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ANKFN1Q8N957 763 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FIG4Q92562 907 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 CENPNQ96H22 339 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 FUBP3Q96I24 572 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDC27-201ENST00000066544 ANKRD60Q9BZ19 345 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 GPR63Q9BZJ6 419 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 NMRK2Q9NPI5 230 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 AGPAT4Q9NRZ5 378 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 PLK2Q9NYY3 685 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 PCTPQ9UKL6 214 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 SCN10AQ9Y5Y9 1956 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 BBIP1A8MTZ0 92 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ACSL4O60488 711 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 LDLRP01130 860 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 KLKB1P03952 638 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 CKBP12277 381 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 OGNP20774 298 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 ENTPD1P49961 510 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 HPCAP84074 193 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 HMGCS1Q01581 520 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 PTGR1Q14914 329 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 C16orf72Q14CZ0 275 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 TAF12Q16514 161 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ATP6AP1LQ52LC2 224 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 GLYATQ6IB77 296 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 HS3ST5Q8IZT8 346 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 CLEC4FQ8N1N0 589 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 MINDY1Q8N5J2 469 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 BIRC7Q96CA5 298 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 THUMPD3Q9BV44 507 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 NSUN3Q9H649 340 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 AFF4Q9UHB7 1163 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 ESRRBO95718 433 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 TFPTP0C1Z6 253 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 SLC26A3P40879 764 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ATP6V0D1P61421 351 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 DSC1Q08554 894 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 TRAF2Q12933 501 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 C8orf82Q6P1X6 216 aaPredicted RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 AFTPHQ6ULP2 937 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 OR56A4Q8NGH8 313 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 MIPOL1Q8TD10 442 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDC27-201ENST00000066544 NSMCE2Q96MF7 247 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 C9orf16Q9BUW7 83 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 ADNPQ9H2P0 1102 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 MRGBPQ9NV56 204 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 AIG1Q9NVV5 245 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 FAM8A1Q9UBU6 413 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 CNOT11Q9UKZ1 510 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 FCF1Q9Y324 198 aaKnown RBP8.2□□□□□ -1.1
CDC27-201ENST00000066544 DOCK4Q8N1I0 1966 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 MYO16Q9Y6X6 1858 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 A0A1W2PPW3 197 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 AQP12BA6NM10 295 aa8.2□□□□□ -1.1
CDC27-201ENST00000066544 SLC2A4P14672 509 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms