RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 PLEKHG1Q9ULL1 1385 aa17.42■□□□□ 0.38
GFAP-237ENST00000640552 USP32Q8NFA0 1604 aa17.42■□□□□ 0.38
GFAP-237ENST00000640552 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
GFAP-237ENST00000640552 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 MED14O60244 1454 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 TRIM6-TRIM34B2RNG4 842 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 HOXC9P31274 260 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 TEFQ10587 303 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 TPRNQ4KMQ1 711 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
GFAP-237ENST00000640552 SIRT1Q96EB6 747 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
GFAP-237ENST00000640552 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
GFAP-237ENST00000640552 ARHGAP45Q92619 1136 aa17.4■□□□□ 0.38
GFAP-237ENST00000640552 RILPL2Q969X0 211 aa17.4■□□□□ 0.38
GFAP-237ENST00000640552 FLT4P35916 1363 aa17.4■□□□□ 0.38
GFAP-237ENST00000640552 PROSER2Q86WR7 435 aaPredicted RBP17.39■□□□□ 0.37
GFAP-237ENST00000640552 DDX17Q92841 729 aaKnown RBP17.39■□□□□ 0.37
GFAP-237ENST00000640552 CDK12Q9NYV4 1490 aaPredicted RBP17.39■□□□□ 0.37
GFAP-237ENST00000640552 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
GFAP-237ENST00000640552 MSH6P52701 1360 aa17.38■□□□□ 0.37
GFAP-237ENST00000640552 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
GFAP-237ENST00000640552 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
GFAP-237ENST00000640552 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
GFAP-237ENST00000640552 FOXD4L4Q8WXT5 416 aaPredicted RBP17.38■□□□□ 0.37
GFAP-237ENST00000640552 AIMP1Q12904 312 aaKnown RBP17.37■□□□□ 0.37
GFAP-237ENST00000640552 OS9Q13438 667 aaPredicted RBP17.37■□□□□ 0.37
GFAP-237ENST00000640552 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 ADGRB2O60241 1585 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 ABCC4O15439 1325 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 HMMRO75330 724 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 FLIIQ13045 1269 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
GFAP-237ENST00000640552 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
GFAP-237ENST00000640552 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
GFAP-237ENST00000640552 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
GFAP-237ENST00000640552 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
GFAP-237ENST00000640552 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 CDC45O75419 566 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
GFAP-237ENST00000640552 KCNQ3O43525 872 aa17.34■□□□□ 0.37
GFAP-237ENST00000640552 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
GFAP-237ENST00000640552 CDC42BPGQ6DT37 1551 aa17.34■□□□□ 0.37
GFAP-237ENST00000640552 TAF7Q15545 349 aaPredicted RBP17.34■□□□□ 0.37
GFAP-237ENST00000640552 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
GFAP-237ENST00000640552 GNAI2P04899 355 aa17.33■□□□□ 0.37
GFAP-237ENST00000640552 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.37
GFAP-237ENST00000640552 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.37
GFAP-237ENST00000640552 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.37
GFAP-237ENST00000640552 SBNO1A3KN83 1393 aa17.33■□□□□ 0.37
GFAP-237ENST00000640552 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
GFAP-237ENST00000640552 ANKRD44Q8N8A2 993 aa17.32■□□□□ 0.36
GFAP-237ENST00000640552 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
GFAP-237ENST00000640552 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
GFAP-237ENST00000640552 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
GFAP-237ENST00000640552 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
GFAP-237ENST00000640552 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
GFAP-237ENST00000640552 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
GFAP-237ENST00000640552 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
GFAP-237ENST00000640552 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
GFAP-237ENST00000640552 NRXN3Q9Y4C0 1643 aa17.3■□□□□ 0.36
GFAP-237ENST00000640552 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
GFAP-237ENST00000640552 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
GFAP-237ENST00000640552 CHMP5Q9NZZ3 219 aa17.3■□□□□ 0.36
GFAP-237ENST00000640552 SDSP20132 328 aa17.3■□□□□ 0.36
GFAP-237ENST00000640552 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
GFAP-237ENST00000640552 CD2BP2O95400 341 aaKnown RBP17.29■□□□□ 0.36
GFAP-237ENST00000640552 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
GFAP-237ENST00000640552 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
GFAP-237ENST00000640552 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 CHPF2Q9P2E5 772 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 PTPRCP08575 1304 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 TECPR2O15040 1411 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
GFAP-237ENST00000640552 CCDC9Q9Y3X0 531 aaKnown RBP17.28■□□□□ 0.36
GFAP-237ENST00000640552 GCP02774 474 aa17.28■□□□□ 0.36
GFAP-237ENST00000640552 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
GFAP-237ENST00000640552 A0A0G2JS52 829 aa17.28■□□□□ 0.36
GFAP-237ENST00000640552 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
GFAP-237ENST00000640552 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
GFAP-237ENST00000640552 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
GFAP-237ENST00000640552 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.36
GFAP-237ENST00000640552 IGSF1Q8N6C5 1336 aa17.27■□□□□ 0.36
GFAP-237ENST00000640552 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
GFAP-237ENST00000640552 SLC39A6Q13433 755 aa17.27■□□□□ 0.35
GFAP-237ENST00000640552 MYL6BP14649 208 aa17.27■□□□□ 0.35
GFAP-237ENST00000640552 C9orf78Q9NZ63 289 aaPredicted RBP17.27■□□□□ 0.35
GFAP-237ENST00000640552 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.35
GFAP-237ENST00000640552 HSPA2P54652 639 aa17.26■□□□□ 0.35
GFAP-237ENST00000640552 KRT28Q7Z3Y7 464 aa17.26■□□□□ 0.35
GFAP-237ENST00000640552 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
GFAP-237ENST00000640552 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms