RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 CHD1LQ86WJ1 897 aa16.8■□□□□ 0.28
SPIN3-235ENST00000640104 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
SPIN3-235ENST00000640104 HOXC9P31274 260 aa16.8■□□□□ 0.28
SPIN3-235ENST00000640104 MARF1Q9Y4F3 1742 aaKnown RBP16.8■□□□□ 0.28
SPIN3-235ENST00000640104 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
SPIN3-235ENST00000640104 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
SPIN3-235ENST00000640104 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
SPIN3-235ENST00000640104 CHD2O14647 1828 aaKnown RBP16.78■□□□□ 0.28
SPIN3-235ENST00000640104 ANKRD45Q5TZF3 282 aa16.78■□□□□ 0.28
SPIN3-235ENST00000640104 GCC1Q96CN9 775 aa16.78■□□□□ 0.28
SPIN3-235ENST00000640104 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
SPIN3-235ENST00000640104 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
SPIN3-235ENST00000640104 LTV1Q96GA3 475 aaPredicted RBP16.77■□□□□ 0.28
SPIN3-235ENST00000640104 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.28
SPIN3-235ENST00000640104 RGS12O14924 1447 aa16.77■□□□□ 0.27
SPIN3-235ENST00000640104 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.27
SPIN3-235ENST00000640104 KIF24Q5T7B8 1368 aa16.76■□□□□ 0.27
SPIN3-235ENST00000640104 BECN1Q14457 450 aa16.76■□□□□ 0.27
SPIN3-235ENST00000640104 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
SPIN3-235ENST00000640104 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
SPIN3-235ENST00000640104 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
SPIN3-235ENST00000640104 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
SPIN3-235ENST00000640104 NWD1Q149M9 1564 aa16.74■□□□□ 0.27
SPIN3-235ENST00000640104 PTPRCP08575 1304 aa16.74■□□□□ 0.27
SPIN3-235ENST00000640104 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
SPIN3-235ENST00000640104 ESCO1Q5FWF5 840 aa16.73■□□□□ 0.27
SPIN3-235ENST00000640104 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
SPIN3-235ENST00000640104 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
SPIN3-235ENST00000640104 MSH6P52701 1360 aa16.73■□□□□ 0.27
SPIN3-235ENST00000640104 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
SPIN3-235ENST00000640104 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
SPIN3-235ENST00000640104 USHBP1Q8N6Y0 703 aa16.72■□□□□ 0.27
SPIN3-235ENST00000640104 HTATSF1O43719 755 aaKnown RBP16.71■□□□□ 0.27
SPIN3-235ENST00000640104 PSME1Q06323 249 aa16.71■□□□□ 0.27
SPIN3-235ENST00000640104 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
SPIN3-235ENST00000640104 NPHP4O75161 1426 aaPredicted RBP16.7■□□□□ 0.26
SPIN3-235ENST00000640104 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
SPIN3-235ENST00000640104 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
SPIN3-235ENST00000640104 G2E3Q7L622 706 aa16.7■□□□□ 0.26
SPIN3-235ENST00000640104 MAP3K5Q99683 1374 aa16.7■□□□□ 0.26
SPIN3-235ENST00000640104 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
SPIN3-235ENST00000640104 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
SPIN3-235ENST00000640104 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
SPIN3-235ENST00000640104 BCL11AQ9H165 835 aa16.69■□□□□ 0.26
SPIN3-235ENST00000640104 LTN1O94822 1766 aa16.69■□□□□ 0.26
SPIN3-235ENST00000640104 MEIS3Q99687 375 aa16.69■□□□□ 0.26
SPIN3-235ENST00000640104 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
SPIN3-235ENST00000640104 SLKQ9H2G2 1235 aaPredicted RBP16.68■□□□□ 0.26
SPIN3-235ENST00000640104 NFAT5O94916 1531 aa16.68■□□□□ 0.26
SPIN3-235ENST00000640104 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
SPIN3-235ENST00000640104 IP6K1Q92551 441 aa16.68■□□□□ 0.26
SPIN3-235ENST00000640104 F6X3S4 739 aa16.67■□□□□ 0.26
SPIN3-235ENST00000640104 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
SPIN3-235ENST00000640104 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
SPIN3-235ENST00000640104 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
SPIN3-235ENST00000640104 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
SPIN3-235ENST00000640104 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
SPIN3-235ENST00000640104 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
SPIN3-235ENST00000640104 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
SPIN3-235ENST00000640104 ORAI2Q96SN7 254 aa16.66■□□□□ 0.26
SPIN3-235ENST00000640104 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
SPIN3-235ENST00000640104 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
SPIN3-235ENST00000640104 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
SPIN3-235ENST00000640104 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
SPIN3-235ENST00000640104 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
SPIN3-235ENST00000640104 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
SPIN3-235ENST00000640104 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
SPIN3-235ENST00000640104 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
SPIN3-235ENST00000640104 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
SPIN3-235ENST00000640104 FLIIQ13045 1269 aa16.62■□□□□ 0.25
SPIN3-235ENST00000640104 PLEKHM2Q8IWE5 1019 aa16.62■□□□□ 0.25
SPIN3-235ENST00000640104 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
SPIN3-235ENST00000640104 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-235ENST00000640104 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
SPIN3-235ENST00000640104 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-235ENST00000640104 ANTXR1Q9H6X2 564 aa16.62■□□□□ 0.25
SPIN3-235ENST00000640104 APBB1O00213 710 aa16.61■□□□□ 0.25
SPIN3-235ENST00000640104 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
SPIN3-235ENST00000640104 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
SPIN3-235ENST00000640104 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
SPIN3-235ENST00000640104 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
SPIN3-235ENST00000640104 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
SPIN3-235ENST00000640104 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
SPIN3-235ENST00000640104 GCP02774 474 aa16.6■□□□□ 0.25
SPIN3-235ENST00000640104 SMARCA5O60264 1052 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-235ENST00000640104 PROSER2Q86WR7 435 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-235ENST00000640104 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-235ENST00000640104 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
SPIN3-235ENST00000640104 CDC45O75419 566 aa16.59■□□□□ 0.25
SPIN3-235ENST00000640104 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.25
SPIN3-235ENST00000640104 HMMRO75330 724 aa16.58■□□□□ 0.25
SPIN3-235ENST00000640104 TTC22Q5TAA0 569 aa16.58■□□□□ 0.25
SPIN3-235ENST00000640104 LGR6Q9HBX8 967 aa16.58■□□□□ 0.25
SPIN3-235ENST00000640104 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
SPIN3-235ENST00000640104 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
SPIN3-235ENST00000640104 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
SPIN3-235ENST00000640104 HSCBQ8IWL3 235 aa16.58■□□□□ 0.24
SPIN3-235ENST00000640104 GNAI2P04899 355 aa16.57■□□□□ 0.24
SPIN3-235ENST00000640104 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
SPIN3-235ENST00000640104 SLIT3O75094 1523 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms