RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 MSH6P52701 1360 aa9.55□□□□□ -0.88
NECAP1-224ENST00000640099 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
NECAP1-224ENST00000640099 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
NECAP1-224ENST00000640099 REREQ9P2R6 1566 aa9.54□□□□□ -0.88
NECAP1-224ENST00000640099 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-224ENST00000640099 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-224ENST00000640099 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
NECAP1-224ENST00000640099 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
NECAP1-224ENST00000640099 TECPR2O15040 1411 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 CHMP5Q9NZZ3 219 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 MCM4P33991 863 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 CEP85Q6P2H3 762 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 EXOC6BQ9Y2D4 811 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 PLEKHG1Q9ULL1 1385 aa9.53□□□□□ -0.88
NECAP1-224ENST00000640099 OVOS2A0A0J9YW53 1432 aa9.52□□□□□ -0.88
NECAP1-224ENST00000640099 OVOS2Q6IE36 1432 aa9.52□□□□□ -0.88
NECAP1-224ENST00000640099 DLG5Q8TDM6 1919 aa9.52□□□□□ -0.88
NECAP1-224ENST00000640099 PIK3R4Q99570 1358 aa9.52□□□□□ -0.89
NECAP1-224ENST00000640099 FKBP5Q13451 457 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-224ENST00000640099 INTS3Q68E01 1043 aaKnown RBP9.52□□□□□ -0.89
NECAP1-224ENST00000640099 DCTPP1Q9H773 170 aa9.52□□□□□ -0.89
NECAP1-224ENST00000640099 CDC45O75419 566 aa9.51□□□□□ -0.89
NECAP1-224ENST00000640099 EIF2S2P20042 333 aaKnown RBP9.51□□□□□ -0.89
NECAP1-224ENST00000640099 ANKRD44Q8N8A2 993 aa9.51□□□□□ -0.89
NECAP1-224ENST00000640099 KIF2CQ99661 725 aa9.51□□□□□ -0.89
NECAP1-224ENST00000640099 RBM25P49756 843 aaKnown RBP9.51□□□□□ -0.89
NECAP1-224ENST00000640099 THEMISQ8N1K5 641 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-224ENST00000640099 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-224ENST00000640099 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
NECAP1-224ENST00000640099 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
NECAP1-224ENST00000640099 KIF13AQ9H1H9 1805 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 C3P01024 1663 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 ITSN1Q15811 1721 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 ANXA1P04083 346 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 SDSP20132 328 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 HOXC9P31274 260 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 TTC22Q5TAA0 569 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 TBX22Q9Y458 520 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 MON2Q7Z3U7 1717 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 UBR1Q8IWV7 1749 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 FLT4P35916 1363 aa9.5□□□□□ -0.89
NECAP1-224ENST00000640099 TRAK2O60296 914 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 CRB1P82279 1406 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 IL17REQ8NFR9 667 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-224ENST00000640099 RGS12O14924 1447 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 ESCO1Q5FWF5 840 aa9.49□□□□□ -0.89
NECAP1-224ENST00000640099 TNPO1Q92973 898 aaKnown RBP9.49□□□□□ -0.89
NECAP1-224ENST00000640099 CEP170BQ9Y4F5 1589 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-224ENST00000640099 SBNO1A3KN83 1393 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 GNAT3A8MTJ3 354 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 FLIIQ13045 1269 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 NOL8Q76FK4 1167 aaKnown RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 LRRC59Q96AG4 307 aaKnown RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 ATP10DQ9P241 1426 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 TTC21AQ8NDW8 1320 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 PHAXQ9H814 394 aaKnown RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
NECAP1-224ENST00000640099 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 FOXD4L5Q5VV16 416 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 FOXD4L4Q8WXT5 416 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-224ENST00000640099 PTPRCP08575 1304 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-224ENST00000640099 SSFA2P28290 1259 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 LGR6Q9HBX8 967 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 AKAP12Q02952 1782 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 KCNQ3O43525 872 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-224ENST00000640099 RILPL2Q969X0 211 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 ARHGEF10O15013 1369 aa9.47□□□□□ -0.89
NECAP1-224ENST00000640099 PSME1Q06323 249 aa9.46□□□□□ -0.89
NECAP1-224ENST00000640099 LRRFIP2Q9Y608 721 aaKnown RBP9.46□□□□□ -0.89
NECAP1-224ENST00000640099 KIAA0232Q92628 1395 aa9.46□□□□□ -0.89
NECAP1-224ENST00000640099 SETD1BQ9UPS6 1966 aaKnown RBP9.46□□□□□ -0.89
NECAP1-224ENST00000640099 TRIM6-TRIM34B2RNG4 842 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 GNAI2P04899 355 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 SSH2Q76I76 1423 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 CCDC30Q5VVM6 783 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 NBPF6Q5VWK0 638 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 SNX21Q969T3 373 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 CHAMP1Q96JM3 812 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 NBPF4Q96M43 638 aa9.46□□□□□ -0.9
NECAP1-224ENST00000640099 RGPD8O14715 1765 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-224ENST00000640099 GOLGA6L3A6NEY3 463 aa9.45□□□□□ -0.9
NECAP1-224ENST00000640099 HMMRO75330 724 aa9.45□□□□□ -0.9
NECAP1-224ENST00000640099 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
NECAP1-224ENST00000640099 CCT4P50991 539 aaKnown RBP9.45□□□□□ -0.9
NECAP1-224ENST00000640099 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms