RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 USP46P62068 366 aa9.38□□□□□ -0.91
SCARB2-206ENST00000638175 PROCA1Q8NCQ7 364 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-206ENST00000638175 TET3O43151 1660 aa9.38□□□□□ -0.91
SCARB2-206ENST00000638175 ANKRD50Q9ULJ7 1429 aa9.38□□□□□ -0.91
SCARB2-206ENST00000638175 IQGAP3Q86VI3 1631 aa9.38□□□□□ -0.91
SCARB2-206ENST00000638175 CFAP65Q6ZU64 1925 aaKnown RBP9.37□□□□□ -0.91
SCARB2-206ENST00000638175 SPRYD7Q5W111 196 aa9.37□□□□□ -0.91
SCARB2-206ENST00000638175 RSBN1LQ6PCB5 846 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-206ENST00000638175 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
SCARB2-206ENST00000638175 SLC6A16Q9GZN6 736 aa9.37□□□□□ -0.91
SCARB2-206ENST00000638175 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
SCARB2-206ENST00000638175 ABCC3O15438 1527 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 ZNF142P52746 1687 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-206ENST00000638175 KDM4AO75164 1064 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 PPP2R2DQ66LE6 453 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 HFM1A2PYH4 1435 aa9.36□□□□□ -0.91
SCARB2-206ENST00000638175 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
SCARB2-206ENST00000638175 FUT2Q10981 343 aa9.35□□□□□ -0.91
SCARB2-206ENST00000638175 CHIC2Q9UKJ5 165 aa9.35□□□□□ -0.91
SCARB2-206ENST00000638175 EFCAB6Q5THR3 1501 aa9.35□□□□□ -0.91
SCARB2-206ENST00000638175 LMTK2Q8IWU2 1503 aa9.35□□□□□ -0.91
SCARB2-206ENST00000638175 MYO3AQ8NEV4 1616 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 KIF3BO15066 747 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 HOXA2O43364 376 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 FLIIQ13045 1269 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 MLECQ14165 292 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 MORN1Q5T089 497 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 ZNF598Q86UK7 904 aaKnown RBP9.34□□□□□ -0.91
SCARB2-206ENST00000638175 SPSB2Q99619 263 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
SCARB2-206ENST00000638175 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
SCARB2-206ENST00000638175 NAIPQ13075 1403 aa9.33□□□□□ -0.92
SCARB2-206ENST00000638175 PZPP20742 1482 aa9.33□□□□□ -0.92
SCARB2-206ENST00000638175 E9PCH4 1651 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 NPATQ14207 1427 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 SPHKAPQ2M3C7 1700 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 ITGAEP38570 1179 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 GGT6Q6P531 493 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 THAP11Q96EK4 314 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 KANK1Q14678 1352 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 SPATA31D1Q6ZQQ2 1576 aa9.32□□□□□ -0.92
SCARB2-206ENST00000638175 KDM5AP29375 1690 aaKnown RBP9.32□□□□□ -0.92
SCARB2-206ENST00000638175 NDUFV2P19404 249 aa9.31□□□□□ -0.92
SCARB2-206ENST00000638175 ATP6V1AP38606 617 aa9.31□□□□□ -0.92
SCARB2-206ENST00000638175 ZNF697Q5TEC3 545 aa9.31□□□□□ -0.92
SCARB2-206ENST00000638175 FBXO31Q5XUX0 539 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-206ENST00000638175 SLC27A5Q9Y2P5 690 aa9.31□□□□□ -0.92
SCARB2-206ENST00000638175 RPRD2Q5VT52 1461 aaKnown RBP9.31□□□□□ -0.92
SCARB2-206ENST00000638175 LILRB3O75022 631 aa9.3□□□□□ -0.92
SCARB2-206ENST00000638175 RFC5P40937 340 aa9.3□□□□□ -0.92
SCARB2-206ENST00000638175 PRPF38BQ5VTL8 546 aaKnown RBP9.3□□□□□ -0.92
SCARB2-206ENST00000638175 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-206ENST00000638175 ARHGAP31Q2M1Z3 1444 aa9.3□□□□□ -0.92
SCARB2-206ENST00000638175 ZMYM3Q14202 1370 aa9.29□□□□□ -0.92
SCARB2-206ENST00000638175 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
SCARB2-206ENST00000638175 WASHC2CQ9Y4E1 1318 aa9.29□□□□□ -0.92
SCARB2-206ENST00000638175 GDF9O60383 454 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 FDX1P10109 184 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 PRR20EP86478 221 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 PRR20CP86479 221 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 PRR20DP86480 221 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 PRR20BP86481 221 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 PRR20AP86496 221 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 MCM6Q14566 821 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 BANK1Q8NDB2 785 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 CEP170BQ9Y4F5 1589 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-206ENST00000638175 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-206ENST00000638175 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
SCARB2-206ENST00000638175 MYO5BQ9ULV0 1848 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 TNFRSF10AO00220 468 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 GRIPAP1Q4V328 841 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 PCDHGC3Q9UN70 934 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 UHRF1BP1Q6BDS2 1440 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 UBR1Q8IWV7 1749 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 LMTK3Q96Q04 1460 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 PIK3C2BO00750 1634 aa9.27□□□□□ -0.93
SCARB2-206ENST00000638175 KIF1BO60333 1816 aa9.26□□□□□ -0.93
SCARB2-206ENST00000638175 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-206ENST00000638175 QPCTQ16769 361 aa9.26□□□□□ -0.93
SCARB2-206ENST00000638175 BRICD5Q6PL45 260 aa9.26□□□□□ -0.93
SCARB2-206ENST00000638175 HLA-CQ95604 372 aa9.26□□□□□ -0.93
SCARB2-206ENST00000638175 NLRP1Q9C000 1473 aa9.26□□□□□ -0.93
SCARB2-206ENST00000638175 SYNMO15061 1565 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 SOCS7O14512 581 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 MYT1Q01538 1121 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 TMEM259Q4ZIN3 620 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 ZMYND15Q9H091 742 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 PRDM9Q9NQV7 894 aa9.25□□□□□ -0.93
SCARB2-206ENST00000638175 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
SCARB2-206ENST00000638175 NUP155O75694 1391 aa9.24□□□□□ -0.93
SCARB2-206ENST00000638175 DGAT1O75907 488 aa9.24□□□□□ -0.93
SCARB2-206ENST00000638175 HRCP23327 699 aa9.24□□□□□ -0.93
SCARB2-206ENST00000638175 GUCA2AQ02747 115 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms