RNA–Protein interactions for RNA: ENST00000636481.1

CHRNA4-215, Transcript of cholinergic receptor nicotinic alpha 4 subunit, human

TSL 5

Gene CHRNA4, Length 126 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA4-215	ENST00000636481	GOLGB1	Q14789	3259 aa	Known RBP	4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ALS2	Q96Q42	1657 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PARP4	Q9UKK3	1724 aa	Known RBP	4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	GLTPD2	A6NH11	291 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	MAP2K1	Q02750	393 aa	Predicted RBP	4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	DGKZ	Q13574	1117 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	DEFB115	Q30KQ5	88 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	DALRD3	Q5D0E6	543 aa	Known RBP	4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CHADL	Q6NUI6	762 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ARHGEF25	Q86VW2	580 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CCDC87	Q9NVE4	849 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PIM2	Q9P1W9	311 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	ROCK1	Q13464	1354 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PPIP5K1	Q6PFW1	1433 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	LRRC37A3	O60309	1634 aa		4.1	□□□□□ -1.75
CHRNA4-215	ENST00000636481	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	LOC105371045	A0A1W2PR82	267 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PLEKHG3	A1L390	1219 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	TMEM88B	A6NKF7	163 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	HMGB2	P26583	209 aa	Known RBP	4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	SRPK2	P78362	688 aa	Known RBP	4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	RASSF7	Q02833	373 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	DPY19L2	Q6NUT2	758 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	KCNH5	Q8NCM2	988 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	CLEC11A	Q9Y240	323 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	KDM2A	Q9Y2K7	1162 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	USP47	Q96K76	1375 aa		4.09	□□□□□ -1.75
CHRNA4-215	ENST00000636481	PAPPA	Q13219	1627 aa		4.09	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.09	□□□□□ -1.76
CHRNA4-215	ENST00000636481	RGPD8	O14715	1765 aa	Predicted RBP	4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	POLR3A	O14802	1390 aa	Predicted RBP	4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	POTEI	P0CG38	1075 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	POTEJ	P0CG39	1038 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	C10orf71	Q711Q0	1435 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	AMIGO3	Q86WK7	504 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ANKRD24	Q8TF21	1146 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	GCC1	Q96CN9	775 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	LTV1	Q96GA3	475 aa	Predicted RBP	4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	WDR33	Q9C0J8	1336 aa	Known RBP	4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ABT1	Q9ULW3	272 aa	Known RBP	4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PARP3	Q9Y6F1	533 aa		4.08	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PXDNL	A1KZ92	1463 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PIK3C2G	O75747	1445 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	POTEC	B2RU33	542 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	LMNB1	P20700	586 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	KCNA3	P22001	575 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CHRNA5	P30532	468 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	TMF1	P82094	1093 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	EAPP	Q56P03	285 aa	Predicted RBP	4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	HABP4	Q5JVS0	413 aa	Known RBP	4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	MPRIP	Q6WCQ1	1025 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	SLC17A8	Q8NDX2	589 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ZCRB1	Q8TBF4	217 aa	Known RBP	4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	DCAF5	Q96JK2	942 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	GPR101	Q96P66	508 aa	Predicted RBP	4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CABP2	Q9NPB3	220 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CABP1	Q9NZU7	370 aa		4.07	□□□□□ -1.76
CHRNA4-215	ENST00000636481	LMO7	Q8WWI1	1683 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ANKRD36B	Q8N2N9	1353 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	GNPAT	O15228	680 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	SSFA2	P28290	1259 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	NLGN1	Q8N2Q7	840 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	NBPF15	Q8N660	670 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	SBF2	Q86WG5	1849 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	IFT172	Q9UG01	1749 aa		4.06	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CPSF1	Q10570	1443 aa	Known RBP	4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	KIF1B	O60333	1816 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CRYBG1	Q9Y4K1	1723 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	RASSF10	A6NK89	507 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	AOC2	O75106	756 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	DDN	O94850	711 aa	Predicted RBP	4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	TRAPPC3L	Q5T215	181 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CYP4F22	Q6NT55	531 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	SMARCC1	Q92922	1105 aa	Predicted RBP	4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CAPNS2	Q96L46	248 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	NHS	Q6T4R5	1651 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PCNT	O95613	3336 aa		4.05	□□□□□ -1.76
CHRNA4-215	ENST00000636481	KIAA1210	Q9ULL0	1709 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	NSD2	O96028	1365 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PALLD	Q8WX93	1383 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	TTC21B	Q7Z4L5	1316 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	PASK	Q96RG2	1323 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ECE1	P42892	770 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	NBPF1	Q3BBV0	1214 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ERFE	Q4G0M1	354 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	LDHD	Q86WU2	507 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	LINC00116	Q8NCU8	138 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	RTCB	Q9Y3I0	505 aa	Known RBP	4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	KNDC1	Q76NI1	1749 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	SPATA31E1	Q6ZUB1	1445 aa		4.04	□□□□□ -1.76
CHRNA4-215	ENST00000636481	TRPM1	Q7Z4N2	1603 aa		4.03	□□□□□ -1.76
CHRNA4-215	ENST00000636481	CIC	Q96RK0	1608 aa	Predicted RBP	4.03	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ITGBL1	O95965	494 aa	Predicted RBP	4.03	□□□□□ -1.76
CHRNA4-215	ENST00000636481	RFC4	P35249	363 aa		4.03	□□□□□ -1.76
CHRNA4-215	ENST00000636481	ATP6V1A	P38606	617 aa		4.03	□□□□□ -1.76
CHRNA4-215	ENST00000636481	MAP1S	Q66K74	1059 aa	Predicted RBP	4.03	□□□□□ -1.76
CHRNA4-215	ENST00000636481	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.03	□□□□□ -1.76

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