RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 TULP4Q9NRJ4 1543 aa7.96□□□□□ -1.14
GABRA1-213ENST00000636340 RPGRIP1LQ68CZ1 1315 aa7.96□□□□□ -1.14
GABRA1-213ENST00000636340 TNNT2P45379 298 aaPredicted RBP7.95□□□□□ -1.14
GABRA1-213ENST00000636340 FBXO31Q5XUX0 539 aaPredicted RBP7.95□□□□□ -1.14
GABRA1-213ENST00000636340 ANTXR1Q9H6X2 564 aa7.95□□□□□ -1.14
GABRA1-213ENST00000636340 NSD2O96028 1365 aa7.95□□□□□ -1.14
GABRA1-213ENST00000636340 PTGER2P43116 358 aa7.95□□□□□ -1.14
GABRA1-213ENST00000636340 TMEM132EQ6IEE7 984 aa7.95□□□□□ -1.14
GABRA1-213ENST00000636340 PDZRN3Q9UPQ7 1066 aa7.95□□□□□ -1.14
GABRA1-213ENST00000636340 ANKRD36BQ8N2N9 1353 aa7.94□□□□□ -1.14
GABRA1-213ENST00000636340 ASTLQ6HA08 431 aaPredicted RBP7.94□□□□□ -1.14
GABRA1-213ENST00000636340 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
GABRA1-213ENST00000636340 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
GABRA1-213ENST00000636340 ARHGEF28Q8N1W1 1705 aaKnown RBP7.94□□□□□ -1.14
GABRA1-213ENST00000636340 PIK3C2BO00750 1634 aa7.94□□□□□ -1.14
GABRA1-213ENST00000636340 ABCC3O15438 1527 aa7.94□□□□□ -1.14
GABRA1-213ENST00000636340 MCM6Q14566 821 aa7.94□□□□□ -1.14
GABRA1-213ENST00000636340 ANO8Q9HCE9 1232 aaPredicted RBP7.94□□□□□ -1.14
GABRA1-213ENST00000636340 HAX1O00165 279 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 MVPQ14764 893 aaKnown RBP7.93□□□□□ -1.14
GABRA1-213ENST00000636340 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 BCL2L13Q9BXK5 485 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 MYH16Q9H6N6 1097 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 NEXMIFQ5QGS0 1516 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
GABRA1-213ENST00000636340 CEBPAP49715 358 aaPredicted RBP7.93□□□□□ -1.14
GABRA1-213ENST00000636340 BECN1Q14457 450 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 RWDD1Q9H446 243 aaPredicted RBP7.93□□□□□ -1.14
GABRA1-213ENST00000636340 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
GABRA1-213ENST00000636340 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
GABRA1-213ENST00000636340 POTEFA5A3E0 1075 aa7.92□□□□□ -1.14
GABRA1-213ENST00000636340 MAP3K7O43318 606 aa7.92□□□□□ -1.14
GABRA1-213ENST00000636340 CT47B1P0C2W7 299 aaPredicted RBP7.92□□□□□ -1.14
GABRA1-213ENST00000636340 PLEKHF1Q96S99 279 aa7.92□□□□□ -1.14
GABRA1-213ENST00000636340 EVC2Q86UK5 1308 aa7.92□□□□□ -1.14
GABRA1-213ENST00000636340 TBC1D2Q9BYX2 928 aa7.91□□□□□ -1.14
GABRA1-213ENST00000636340 CLTCQ00610 1675 aaKnown RBP7.91□□□□□ -1.14
GABRA1-213ENST00000636340 ABCC11Q96J66 1382 aa7.91□□□□□ -1.14
GABRA1-213ENST00000636340 G3V3G9 751 aa7.91□□□□□ -1.14
GABRA1-213ENST00000636340 U2AF1L5P0DN76 240 aaPredicted RBP7.91□□□□□ -1.14
GABRA1-213ENST00000636340 PLCG2P16885 1265 aa7.91□□□□□ -1.14
GABRA1-213ENST00000636340 U2AF1Q01081 240 aaKnown RBP eCLIP7.91□□□□□ -1.14
GABRA1-213ENST00000636340 ZKSCAN2Q63HK3 967 aa7.91□□□□□ -1.14
GABRA1-213ENST00000636340 POGKQ9P215 609 aa7.9□□□□□ -1.14
GABRA1-213ENST00000636340 RIMS1Q86UR5 1692 aaKnown RBP7.9□□□□□ -1.14
GABRA1-213ENST00000636340 FER1L4A9Z1Z3 1794 aa7.9□□□□□ -1.14
GABRA1-213ENST00000636340 HDAC1Q13547 482 aaPredicted RBP7.9□□□□□ -1.15
GABRA1-213ENST00000636340 DZIP1LQ8IYY4 767 aaKnown RBP7.9□□□□□ -1.15
GABRA1-213ENST00000636340 NECTIN2Q92692 538 aa7.9□□□□□ -1.15
GABRA1-213ENST00000636340 PCDHGA10Q9Y5H3 936 aa7.9□□□□□ -1.15
GABRA1-213ENST00000636340 A0A1W2PP64 1363 aa7.9□□□□□ -1.15
GABRA1-213ENST00000636340 ZFYVE9O95405 1425 aa7.9□□□□□ -1.15
GABRA1-213ENST00000636340 MED14O60244 1454 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 TBC1D12O60347 775 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 TRIM27P14373 513 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 TMPOP42166 694 aaKnown RBP7.89□□□□□ -1.15
GABRA1-213ENST00000636340 EN1Q05925 392 aaPredicted RBP7.89□□□□□ -1.15
GABRA1-213ENST00000636340 TSR2Q969E8 191 aaKnown RBP7.89□□□□□ -1.15
GABRA1-213ENST00000636340 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 SLKQ9H2G2 1235 aaPredicted RBP7.89□□□□□ -1.15
GABRA1-213ENST00000636340 REREQ9P2R6 1566 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 CD163L1Q9NR16 1453 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 ARHGAP31Q2M1Z3 1444 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 IL16Q14005 1332 aa7.89□□□□□ -1.15
GABRA1-213ENST00000636340 KDM4FA0A1W2PPD8 638 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 EXOSC9Q06265 439 aaKnown RBP7.88□□□□□ -1.15
GABRA1-213ENST00000636340 FLIIQ13045 1269 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 SSH1Q8WYL5 1049 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 UPF2Q9HAU5 1272 aaKnown RBP7.88□□□□□ -1.15
GABRA1-213ENST00000636340 ANKRD26Q9UPS8 1709 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 TRAK2O60296 914 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 AGLP35573 1532 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 PTPRMP28827 1452 aa7.88□□□□□ -1.15
GABRA1-213ENST00000636340 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 SSTR3P32745 418 aaPredicted RBP7.87□□□□□ -1.15
GABRA1-213ENST00000636340 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
GABRA1-213ENST00000636340 ATF7IPQ6VMQ6 1270 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 SMC5Q8IY18 1101 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 ESF1Q9H501 851 aaKnown RBP7.87□□□□□ -1.15
GABRA1-213ENST00000636340 SMC4Q9NTJ3 1288 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 FYB1O15117 783 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 FTSJ3Q8IY81 847 aaKnown RBP7.87□□□□□ -1.15
GABRA1-213ENST00000636340 FAM43AQ8N2R8 423 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 GPCPD1Q9NPB8 672 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 ZBTB40Q9NUA8 1239 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 DDX19BQ9UMR2 479 aa7.87□□□□□ -1.15
GABRA1-213ENST00000636340 IDI1Q13907 227 aa7.86□□□□□ -1.15
GABRA1-213ENST00000636340 METTL3Q86U44 580 aaKnown RBP7.86□□□□□ -1.15
GABRA1-213ENST00000636340 PTCD2Q8WV60 388 aaKnown RBP7.86□□□□□ -1.15
GABRA1-213ENST00000636340 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
GABRA1-213ENST00000636340 C22orf23Q9BZE7 217 aa7.86□□□□□ -1.15
GABRA1-213ENST00000636340 GGNBP2Q9H3C7 697 aa7.86□□□□□ -1.15
GABRA1-213ENST00000636340 NOB1Q9ULX3 412 aaKnown RBP7.86□□□□□ -1.15
GABRA1-213ENST00000636340 ADAMTSL3P82987 1691 aa7.86□□□□□ -1.15
GABRA1-213ENST00000636340 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
GABRA1-213ENST00000636340 IER5LQ5T953 404 aa7.86□□□□□ -1.15
GABRA1-213ENST00000636340 C3P01024 1663 aa7.85□□□□□ -1.15
GABRA1-213ENST00000636340 U2SURPO15042 1029 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms