RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-209ENST00000635885 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-209ENST00000635885 NUCB1Q02818 461 aa13.07□□□□□ -0.32
SYNGAP1-209ENST00000635885 NUTM2GQ5VZR2 741 aa13.07□□□□□ -0.32
SYNGAP1-209ENST00000635885 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
SYNGAP1-209ENST00000635885 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 FOXO3O43524 673 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 ABTB2Q8N961 1025 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 NFAT5O94916 1531 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-209ENST00000635885 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
SYNGAP1-209ENST00000635885 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-209ENST00000635885 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-209ENST00000635885 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-209ENST00000635885 RGS12O14924 1447 aa13.05□□□□□ -0.32
SYNGAP1-209ENST00000635885 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
SYNGAP1-209ENST00000635885 PROSER2Q86WR7 435 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-209ENST00000635885 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
SYNGAP1-209ENST00000635885 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
SYNGAP1-209ENST00000635885 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-209ENST00000635885 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-209ENST00000635885 HSPA2P54652 639 aa13.03□□□□□ -0.32
SYNGAP1-209ENST00000635885 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
SYNGAP1-209ENST00000635885 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
SYNGAP1-209ENST00000635885 TBC1D32Q96NH3 1257 aa13.03□□□□□ -0.32
SYNGAP1-209ENST00000635885 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
SYNGAP1-209ENST00000635885 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-209ENST00000635885 IP6K1Q92551 441 aa13.02□□□□□ -0.33
SYNGAP1-209ENST00000635885 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-209ENST00000635885 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-209ENST00000635885 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
SYNGAP1-209ENST00000635885 PTPRCP08575 1304 aa13.02□□□□□ -0.33
SYNGAP1-209ENST00000635885 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 MSH6P52701 1360 aa13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 KIF1AQ12756 1690 aa13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
SYNGAP1-209ENST00000635885 RGPD5Q99666 1765 aa13□□□□□ -0.33
SYNGAP1-209ENST00000635885 MAP3K5Q99683 1374 aa13□□□□□ -0.33
SYNGAP1-209ENST00000635885 PSME1Q06323 249 aa13□□□□□ -0.33
SYNGAP1-209ENST00000635885 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
SYNGAP1-209ENST00000635885 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
SYNGAP1-209ENST00000635885 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
SYNGAP1-209ENST00000635885 SLIT3O75094 1523 aa12.99□□□□□ -0.33
SYNGAP1-209ENST00000635885 BECN1Q14457 450 aa12.99□□□□□ -0.33
SYNGAP1-209ENST00000635885 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
SYNGAP1-209ENST00000635885 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
SYNGAP1-209ENST00000635885 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SYNGAP1-209ENST00000635885 G2E3Q7L622 706 aa12.98□□□□□ -0.33
SYNGAP1-209ENST00000635885 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
SYNGAP1-209ENST00000635885 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
SYNGAP1-209ENST00000635885 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
SYNGAP1-209ENST00000635885 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
SYNGAP1-209ENST00000635885 DCCP43146 1447 aa12.97□□□□□ -0.33
SYNGAP1-209ENST00000635885 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-209ENST00000635885 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-209ENST00000635885 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 ATF3P18847 181 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
SYNGAP1-209ENST00000635885 STRCP1A6NGW2 1772 aa12.96□□□□□ -0.34
SYNGAP1-209ENST00000635885 ALS2Q96Q42 1657 aa12.96□□□□□ -0.34
SYNGAP1-209ENST00000635885 TMEM94Q12767 1356 aa12.95□□□□□ -0.34
SYNGAP1-209ENST00000635885 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-209ENST00000635885 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
SYNGAP1-209ENST00000635885 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 NFKBIBQ15653 356 aa12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-209ENST00000635885 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
SYNGAP1-209ENST00000635885 MEIS3Q99687 375 aa12.93□□□□□ -0.34
SYNGAP1-209ENST00000635885 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
SYNGAP1-209ENST00000635885 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
SYNGAP1-209ENST00000635885 F6X3S4 739 aa12.92□□□□□ -0.34
SYNGAP1-209ENST00000635885 KRT28Q7Z3Y7 464 aa12.92□□□□□ -0.34
SYNGAP1-209ENST00000635885 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
SYNGAP1-209ENST00000635885 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
SYNGAP1-209ENST00000635885 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
SYNGAP1-209ENST00000635885 MST1RQ04912 1400 aa12.91□□□□□ -0.34
SYNGAP1-209ENST00000635885 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
SYNGAP1-209ENST00000635885 GCP02774 474 aa12.91□□□□□ -0.34
SYNGAP1-209ENST00000635885 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-209ENST00000635885 PLEKHM2Q8IWE5 1019 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms