RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
SYNGAP1-207ENST00000628646 ERBB3P21860 1342 aa15.91■□□□□ 0.14
SYNGAP1-207ENST00000628646 MIS18AQ9NYP9 233 aa15.91■□□□□ 0.14
SYNGAP1-207ENST00000628646 E9PSI1 815 aa15.9■□□□□ 0.14
SYNGAP1-207ENST00000628646 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-207ENST00000628646 USP31Q70CQ4 1352 aa15.9■□□□□ 0.14
SYNGAP1-207ENST00000628646 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-207ENST00000628646 CRBNQ96SW2 442 aa15.9■□□□□ 0.14
SYNGAP1-207ENST00000628646 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
SYNGAP1-207ENST00000628646 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
SYNGAP1-207ENST00000628646 ANKRD26Q9UPS8 1709 aa15.89■□□□□ 0.13
SYNGAP1-207ENST00000628646 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
SYNGAP1-207ENST00000628646 MTHFSDQ2M296 383 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-207ENST00000628646 BCL2L13Q9BXK5 485 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 CD163L1Q9NR16 1453 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 PNPLA6Q8IY17 1366 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 KNDC1Q76NI1 1749 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 CHMP4AQ9BY43 222 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 SMC4Q9NTJ3 1288 aa15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 TSR2Q969E8 191 aaKnown RBP15.88■□□□□ 0.13
SYNGAP1-207ENST00000628646 RXRBP28702 533 aa15.87■□□□□ 0.13
SYNGAP1-207ENST00000628646 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
SYNGAP1-207ENST00000628646 CARD10Q9BWT7 1032 aa15.87■□□□□ 0.13
SYNGAP1-207ENST00000628646 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
SYNGAP1-207ENST00000628646 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
SYNGAP1-207ENST00000628646 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
SYNGAP1-207ENST00000628646 NALCNQ8IZF0 1738 aa15.86■□□□□ 0.13
SYNGAP1-207ENST00000628646 RTL1A6NKG5 1358 aa15.85■□□□□ 0.13
SYNGAP1-207ENST00000628646 FAM182BQ5T319 152 aa15.85■□□□□ 0.13
SYNGAP1-207ENST00000628646 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
SYNGAP1-207ENST00000628646 ITSN1Q15811 1721 aa15.85■□□□□ 0.13
SYNGAP1-207ENST00000628646 USP19O94966 1318 aa15.84■□□□□ 0.13
SYNGAP1-207ENST00000628646 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
SYNGAP1-207ENST00000628646 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
SYNGAP1-207ENST00000628646 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
SYNGAP1-207ENST00000628646 PCDH11XQ9BZA7 1347 aa15.83■□□□□ 0.13
SYNGAP1-207ENST00000628646 PCDH11YQ9BZA8 1340 aa15.83■□□□□ 0.13
SYNGAP1-207ENST00000628646 OVOS2A0A0J9YW53 1432 aa15.83■□□□□ 0.13
SYNGAP1-207ENST00000628646 OVOS2Q6IE36 1432 aa15.83■□□□□ 0.13
SYNGAP1-207ENST00000628646 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
SYNGAP1-207ENST00000628646 SLC4A10Q6U841 1118 aa15.82■□□□□ 0.12
SYNGAP1-207ENST00000628646 SKAP1Q86WV1 359 aa15.82■□□□□ 0.12
SYNGAP1-207ENST00000628646 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
SYNGAP1-207ENST00000628646 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
SYNGAP1-207ENST00000628646 EXOSC9Q06265 439 aaKnown RBP15.81■□□□□ 0.12
SYNGAP1-207ENST00000628646 SEPT12Q8IYM1 358 aa15.81■□□□□ 0.12
SYNGAP1-207ENST00000628646 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
SYNGAP1-207ENST00000628646 CLUAP1Q96AJ1 413 aa15.81■□□□□ 0.12
SYNGAP1-207ENST00000628646 AIMP1Q12904 312 aaKnown RBP15.8■□□□□ 0.12
SYNGAP1-207ENST00000628646 SLC39A6Q13433 755 aa15.8■□□□□ 0.12
SYNGAP1-207ENST00000628646 GJD4Q96KN9 370 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-207ENST00000628646 IPO8O15397 1037 aaKnown RBP15.8■□□□□ 0.12
SYNGAP1-207ENST00000628646 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
SYNGAP1-207ENST00000628646 WDR63Q8IWG1 891 aa15.8■□□□□ 0.12
SYNGAP1-207ENST00000628646 ANP32AP39687 249 aaKnown RBP15.79■□□□□ 0.12
SYNGAP1-207ENST00000628646 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
SYNGAP1-207ENST00000628646 BACH2Q9BYV9 841 aa15.79■□□□□ 0.12
SYNGAP1-207ENST00000628646 RGPD8O14715 1765 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-207ENST00000628646 MS4A1P11836 297 aa15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 RBM6P78332 1123 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-207ENST00000628646 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
SYNGAP1-207ENST00000628646 LGR6Q9HBX8 967 aa15.77■□□□□ 0.12
SYNGAP1-207ENST00000628646 MAP3K5Q99683 1374 aa15.77■□□□□ 0.11
SYNGAP1-207ENST00000628646 BCAR3O75815 825 aa15.77■□□□□ 0.11
SYNGAP1-207ENST00000628646 LTBP4Q8N2S1 1624 aa15.77■□□□□ 0.11
SYNGAP1-207ENST00000628646 PDE4AP27815 886 aa15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 VPS72Q15906 364 aa15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-207ENST00000628646 MYL6BP14649 208 aa15.75■□□□□ 0.11
SYNGAP1-207ENST00000628646 THRAP3Q9Y2W1 955 aaKnown RBP15.75■□□□□ 0.11
SYNGAP1-207ENST00000628646 IPO9Q96P70 1041 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 PHKG2P15735 406 aa15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 CRB1P82279 1406 aa15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 BCL11BQ9C0K0 894 aaPredicted RBP15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 IFT57Q9NWB7 429 aa15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 STARD3NLO95772 234 aa15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
SYNGAP1-207ENST00000628646 CPDO75976 1380 aa15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 PXDNQ92626 1479 aa15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 ITPRIPQ8IWB1 547 aa15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 SSH2Q76I76 1423 aa15.73■□□□□ 0.11
SYNGAP1-207ENST00000628646 HTATSF1O43719 755 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms