RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
CHD2-209ENST00000627185 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
CHD2-209ENST00000627185 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
CHD2-209ENST00000627185 USP35Q9P2H5 1018 aa10.95□□□□□ -0.66
CHD2-209ENST00000627185 PPIP5K1Q6PFW1 1433 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 PLIN1O60240 522 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 FCHSD2O94868 740 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
CHD2-209ENST00000627185 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
CHD2-209ENST00000627185 C20orf194Q5TEA3 1177 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 FBXW7Q969H0 707 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 SETD1AO15047 1707 aaKnown RBP10.94□□□□□ -0.66
CHD2-209ENST00000627185 RIMBP3CA6NJZ7 1639 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 RIMBP3BA6NNM3 1639 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 RIMBP3Q9UFD9 1639 aa10.94□□□□□ -0.66
CHD2-209ENST00000627185 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
CHD2-209ENST00000627185 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
CHD2-209ENST00000627185 FYB1O15117 783 aa10.93□□□□□ -0.66
CHD2-209ENST00000627185 LHX8Q68G74 356 aa10.93□□□□□ -0.66
CHD2-209ENST00000627185 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
CHD2-209ENST00000627185 FAM69CQ0P6D2 419 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 PTGDRQ13258 359 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 HIC1Q14526 733 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 KNDC1Q76NI1 1749 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 RIMS2Q9UQ26 1411 aa10.92□□□□□ -0.66
CHD2-209ENST00000627185 GNPATO15228 680 aa10.91□□□□□ -0.66
CHD2-209ENST00000627185 MAP3K7O43318 606 aa10.91□□□□□ -0.66
CHD2-209ENST00000627185 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
CHD2-209ENST00000627185 AK7Q96M32 723 aa10.91□□□□□ -0.66
CHD2-209ENST00000627185 PRAM1Q96QH2 718 aa10.91□□□□□ -0.66
CHD2-209ENST00000627185 EDC4Q6P2E9 1401 aaKnown RBP10.91□□□□□ -0.66
CHD2-209ENST00000627185 ZNF454Q8N9F8 522 aa10.9□□□□□ -0.66
CHD2-209ENST00000627185 CPS1P31327 1500 aa10.89□□□□□ -0.67
CHD2-209ENST00000627185 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
CHD2-209ENST00000627185 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
CHD2-209ENST00000627185 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
CHD2-209ENST00000627185 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
CHD2-209ENST00000627185 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
CHD2-209ENST00000627185 NRXN3Q9Y4C0 1643 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 PPM1GO15355 546 aaPredicted RBP10.88□□□□□ -0.67
CHD2-209ENST00000627185 BCAR3O75815 825 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 TMPOP42166 694 aaKnown RBP10.88□□□□□ -0.67
CHD2-209ENST00000627185 SRPK2P78362 688 aaKnown RBP10.88□□□□□ -0.67
CHD2-209ENST00000627185 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 ALDH1L2Q3SY69 923 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 C8orf34Q49A92 452 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 CYB5RLQ6IPT4 315 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 CDK19Q9BWU1 502 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 POGKQ9P215 609 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 MYO5BQ9ULV0 1848 aa10.88□□□□□ -0.67
CHD2-209ENST00000627185 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
CHD2-209ENST00000627185 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
CHD2-209ENST00000627185 MINK1Q8N4C8 1332 aaPredicted RBP10.87□□□□□ -0.67
CHD2-209ENST00000627185 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
CHD2-209ENST00000627185 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
CHD2-209ENST00000627185 FBXO31Q5XUX0 539 aaPredicted RBP10.87□□□□□ -0.67
CHD2-209ENST00000627185 SENP3-EIF4A1A0A087X0R7 540 aa10.86□□□□□ -0.67
CHD2-209ENST00000627185 PSDA5PKW4 1024 aaPredicted RBP10.86□□□□□ -0.67
CHD2-209ENST00000627185 DIAPH1O60610 1272 aaKnown RBP10.86□□□□□ -0.67
CHD2-209ENST00000627185 U2AF1L5P0DN76 240 aaPredicted RBP10.86□□□□□ -0.67
CHD2-209ENST00000627185 U2AF1Q01081 240 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD2-209ENST00000627185 WASLO00401 505 aaPredicted RBP10.85□□□□□ -0.67
CHD2-209ENST00000627185 FECHP22830 423 aa10.85□□□□□ -0.67
CHD2-209ENST00000627185 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
CHD2-209ENST00000627185 KIF16BQ96L93 1317 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 KIF20BQ96Q89 1820 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 IRF6O14896 467 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 HDAC1Q13547 482 aaPredicted RBP10.84□□□□□ -0.67
CHD2-209ENST00000627185 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
CHD2-209ENST00000627185 C6orf132Q5T0Z8 1188 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 ARHGAP45Q92619 1136 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 ADAM33Q9BZ11 813 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 TMEM2Q9UHN6 1383 aa10.84□□□□□ -0.67
CHD2-209ENST00000627185 TNRQ92752 1358 aa10.83□□□□□ -0.68
CHD2-209ENST00000627185 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
CHD2-209ENST00000627185 TRIM66O15016 1216 aa10.83□□□□□ -0.68
CHD2-209ENST00000627185 CCDC102AQ96A19 550 aa10.83□□□□□ -0.68
CHD2-209ENST00000627185 RWDD1Q9H446 243 aaPredicted RBP10.83□□□□□ -0.68
CHD2-209ENST00000627185 CABP1Q9NZU7 370 aa10.83□□□□□ -0.68
CHD2-209ENST00000627185 KIF24Q5T7B8 1368 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 IPO8O15397 1037 aaKnown RBP10.82□□□□□ -0.68
CHD2-209ENST00000627185 IGHDP01880 384 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 CERKQ8TCT0 537 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 GGNBP2Q9H3C7 697 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 POLKQ9UBT6 870 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 DDX19BQ9UMR2 479 aa10.82□□□□□ -0.68
CHD2-209ENST00000627185 MON2Q7Z3U7 1717 aa10.81□□□□□ -0.68
CHD2-209ENST00000627185 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms