RNA–Protein interactions for RNA: ENST00000627144.2

SMIM7-221, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-221ENST00000627144 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
SMIM7-221ENST00000627144 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
SMIM7-221ENST00000627144 ATF3P18847 181 aa12.97□□□□□ -0.33
SMIM7-221ENST00000627144 AEBP1Q8IUX7 1158 aa12.97□□□□□ -0.33
SMIM7-221ENST00000627144 C8orf58Q8NAV2 365 aa12.97□□□□□ -0.33
SMIM7-221ENST00000627144 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
SMIM7-221ENST00000627144 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
SMIM7-221ENST00000627144 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
SMIM7-221ENST00000627144 PIK3C2AO00443 1686 aa12.96□□□□□ -0.34
SMIM7-221ENST00000627144 ELL2O00472 640 aaPredicted RBP12.96□□□□□ -0.34
SMIM7-221ENST00000627144 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.34
SMIM7-221ENST00000627144 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.34
SMIM7-221ENST00000627144 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
SMIM7-221ENST00000627144 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
SMIM7-221ENST00000627144 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
SMIM7-221ENST00000627144 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
SMIM7-221ENST00000627144 FOXO3O43524 673 aa12.94□□□□□ -0.34
SMIM7-221ENST00000627144 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
SMIM7-221ENST00000627144 CHD1LQ86WJ1 897 aa12.94□□□□□ -0.34
SMIM7-221ENST00000627144 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
SMIM7-221ENST00000627144 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
SMIM7-221ENST00000627144 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
SMIM7-221ENST00000627144 CHL1O00533 1208 aa12.93□□□□□ -0.34
SMIM7-221ENST00000627144 FLT4P35916 1363 aa12.93□□□□□ -0.34
SMIM7-221ENST00000627144 MSH6P52701 1360 aa12.93□□□□□ -0.34
SMIM7-221ENST00000627144 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
SMIM7-221ENST00000627144 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
SMIM7-221ENST00000627144 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
SMIM7-221ENST00000627144 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
SMIM7-221ENST00000627144 KDRP35968 1356 aa12.92□□□□□ -0.34
SMIM7-221ENST00000627144 XPCQ01831 940 aaPredicted RBP12.91□□□□□ -0.34
SMIM7-221ENST00000627144 PSME1Q06323 249 aa12.91□□□□□ -0.34
SMIM7-221ENST00000627144 C22orf23Q9BZE7 217 aa12.91□□□□□ -0.34
SMIM7-221ENST00000627144 MST1RQ04912 1400 aa12.91□□□□□ -0.34
SMIM7-221ENST00000627144 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
SMIM7-221ENST00000627144 CRB1P82279 1406 aa12.91□□□□□ -0.34
SMIM7-221ENST00000627144 NLRP6P59044 892 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 MCM10Q7L590 875 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 C1orf115Q9H7X2 142 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 RGS12O14924 1447 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 DCCP43146 1447 aa12.9□□□□□ -0.34
SMIM7-221ENST00000627144 MFAP1P55081 439 aaKnown RBP12.9□□□□□ -0.34
SMIM7-221ENST00000627144 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
SMIM7-221ENST00000627144 NUTM2GQ5VZR2 741 aa12.89□□□□□ -0.35
SMIM7-221ENST00000627144 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
SMIM7-221ENST00000627144 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
SMIM7-221ENST00000627144 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
SMIM7-221ENST00000627144 SOX12O15370 315 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 FRAT2O75474 233 aaPredicted RBP12.88□□□□□ -0.35
SMIM7-221ENST00000627144 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 PTPRCP08575 1304 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 LTN1O94822 1766 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 GSE1Q14687 1217 aa12.88□□□□□ -0.35
SMIM7-221ENST00000627144 AMPHP49418 695 aa12.87□□□□□ -0.35
SMIM7-221ENST00000627144 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
SMIM7-221ENST00000627144 KRT24Q2M2I5 525 aa12.87□□□□□ -0.35
SMIM7-221ENST00000627144 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
SMIM7-221ENST00000627144 LTBP4Q8N2S1 1624 aa12.86□□□□□ -0.35
SMIM7-221ENST00000627144 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
SMIM7-221ENST00000627144 BRINP3Q76B58 766 aa12.86□□□□□ -0.35
SMIM7-221ENST00000627144 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
SMIM7-221ENST00000627144 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
SMIM7-221ENST00000627144 LRRC37A3O60309 1634 aa12.86□□□□□ -0.35
SMIM7-221ENST00000627144 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
SMIM7-221ENST00000627144 EYA1Q99502 592 aa12.86□□□□□ -0.35
SMIM7-221ENST00000627144 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
SMIM7-221ENST00000627144 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
SMIM7-221ENST00000627144 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
SMIM7-221ENST00000627144 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
SMIM7-221ENST00000627144 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
SMIM7-221ENST00000627144 RTL1A6NKG5 1358 aa12.83□□□□□ -0.35
SMIM7-221ENST00000627144 HOXC9P31274 260 aa12.83□□□□□ -0.36
SMIM7-221ENST00000627144 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
SMIM7-221ENST00000627144 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
SMIM7-221ENST00000627144 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
SMIM7-221ENST00000627144 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.36
SMIM7-221ENST00000627144 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
SMIM7-221ENST00000627144 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
SMIM7-221ENST00000627144 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
SMIM7-221ENST00000627144 CEP85Q6P2H3 762 aa12.81□□□□□ -0.36
SMIM7-221ENST00000627144 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
SMIM7-221ENST00000627144 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
SMIM7-221ENST00000627144 SNX21Q969T3 373 aa12.81□□□□□ -0.36
SMIM7-221ENST00000627144 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
SMIM7-221ENST00000627144 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
SMIM7-221ENST00000627144 NFAT5O94916 1531 aa12.8□□□□□ -0.36
SMIM7-221ENST00000627144 GNAT3A8MTJ3 354 aa12.8□□□□□ -0.36
SMIM7-221ENST00000627144 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
SMIM7-221ENST00000627144 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
SMIM7-221ENST00000627144 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
SMIM7-221ENST00000627144 CDC45O75419 566 aa12.79□□□□□ -0.36
SMIM7-221ENST00000627144 MEIS3Q99687 375 aa12.79□□□□□ -0.36
SMIM7-221ENST00000627144 GSPT1P15170 499 aaKnown RBP12.79□□□□□ -0.36
SMIM7-221ENST00000627144 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
SMIM7-221ENST00000627144 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms