RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 ABCC6O95255 1503 aa20.78■□□□□ 0.92
RPL13A-214ENST00000624069 TFCP2L1Q9NZI6 479 aa20.78■□□□□ 0.92
RPL13A-214ENST00000624069 NFAT5O94916 1531 aa20.78■□□□□ 0.92
RPL13A-214ENST00000624069 CEP350Q5VT06 3117 aa20.78■□□□□ 0.92
RPL13A-214ENST00000624069 RGPD5Q99666 1765 aa20.77■□□□□ 0.92
RPL13A-214ENST00000624069 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
RPL13A-214ENST00000624069 HSPA6P17066 643 aa20.76■□□□□ 0.91
RPL13A-214ENST00000624069 KCNQ4P56696 695 aa20.76■□□□□ 0.91
RPL13A-214ENST00000624069 KIF7Q2M1P5 1343 aa20.74■□□□□ 0.91
RPL13A-214ENST00000624069 BTAF1O14981 1849 aa20.74■□□□□ 0.91
RPL13A-214ENST00000624069 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
RPL13A-214ENST00000624069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.73■□□□□ 0.91
RPL13A-214ENST00000624069 GPBP1L1Q9HC44 474 aaPredicted RBP20.73■□□□□ 0.91
RPL13A-214ENST00000624069 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
RPL13A-214ENST00000624069 DDX54Q8TDD1 881 aaKnown RBP20.71■□□□□ 0.91
RPL13A-214ENST00000624069 USP54Q70EL1 1684 aa20.7■□□□□ 0.9
RPL13A-214ENST00000624069 USP31Q70CQ4 1352 aa20.7■□□□□ 0.9
RPL13A-214ENST00000624069 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
RPL13A-214ENST00000624069 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
RPL13A-214ENST00000624069 COL23A1Q86Y22 540 aaPredicted RBP20.69■□□□□ 0.9
RPL13A-214ENST00000624069 NME9Q86XW9 330 aa20.68■□□□□ 0.9
RPL13A-214ENST00000624069 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
RPL13A-214ENST00000624069 GOLGB1Q14789 3259 aaKnown RBP20.67■□□□□ 0.9
RPL13A-214ENST00000624069 ADCY9O60503 1353 aa20.67■□□□□ 0.9
RPL13A-214ENST00000624069 KIF20BQ96Q89 1820 aa20.67■□□□□ 0.9
RPL13A-214ENST00000624069 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
RPL13A-214ENST00000624069 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
RPL13A-214ENST00000624069 KAT6BQ8WYB5 2073 aa20.65■□□□□ 0.9
RPL13A-214ENST00000624069 MSH5O43196 834 aa20.65■□□□□ 0.9
RPL13A-214ENST00000624069 ZNF526Q8TF50 670 aaPredicted RBP20.65■□□□□ 0.9
RPL13A-214ENST00000624069 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
RPL13A-214ENST00000624069 MSL1Q68DK7 614 aa20.64■□□□□ 0.89
RPL13A-214ENST00000624069 CCNL1Q9UK58 526 aaPredicted RBP20.64■□□□□ 0.89
RPL13A-214ENST00000624069 NSD2O96028 1365 aa20.63■□□□□ 0.89
RPL13A-214ENST00000624069 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
RPL13A-214ENST00000624069 PANK3Q9H999 370 aa20.63■□□□□ 0.89
RPL13A-214ENST00000624069 COG3Q96JB2 828 aa20.61■□□□□ 0.89
RPL13A-214ENST00000624069 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
RPL13A-214ENST00000624069 KIF3CO14782 793 aa20.6■□□□□ 0.89
RPL13A-214ENST00000624069 IP6K1Q92551 441 aa20.6■□□□□ 0.89
RPL13A-214ENST00000624069 GGNBP2Q9H3C7 697 aa20.59■□□□□ 0.89
RPL13A-214ENST00000624069 TUBGCP6Q96RT7 1819 aa20.59■□□□□ 0.89
RPL13A-214ENST00000624069 FYB1O15117 783 aa20.58■□□□□ 0.89
RPL13A-214ENST00000624069 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
RPL13A-214ENST00000624069 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
RPL13A-214ENST00000624069 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
RPL13A-214ENST00000624069 DNAJC5GQ8N7S2 189 aa20.55■□□□□ 0.88
RPL13A-214ENST00000624069 FLAD1Q8NFF5 587 aa20.55■□□□□ 0.88
RPL13A-214ENST00000624069 KNSTRNQ9Y448 316 aa20.55■□□□□ 0.88
RPL13A-214ENST00000624069 LTN1O94822 1766 aa20.54■□□□□ 0.88
RPL13A-214ENST00000624069 LY75O60449 1722 aa20.53■□□□□ 0.88
RPL13A-214ENST00000624069 APLP1P51693 650 aa20.53■□□□□ 0.88
RPL13A-214ENST00000624069 WWC3Q9ULE0 1092 aa20.52■□□□□ 0.88
RPL13A-214ENST00000624069 IGSF1Q8N6C5 1336 aa20.52■□□□□ 0.87
RPL13A-214ENST00000624069 TOMM70O94826 608 aa20.47■□□□□ 0.87
RPL13A-214ENST00000624069 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
RPL13A-214ENST00000624069 HOXC9P31274 260 aa20.47■□□□□ 0.87
RPL13A-214ENST00000624069 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
RPL13A-214ENST00000624069 MAP3K19Q56UN5 1328 aa20.47■□□□□ 0.87
RPL13A-214ENST00000624069 MEGF6O75095 1541 aa20.47■□□□□ 0.87
RPL13A-214ENST00000624069 DOT1LQ8TEK3 1739 aa20.47■□□□□ 0.87
RPL13A-214ENST00000624069 FBLN1P23142 703 aa20.46■□□□□ 0.87
RPL13A-214ENST00000624069 AMER1Q5JTC6 1135 aaPredicted RBP20.46■□□□□ 0.87
RPL13A-214ENST00000624069 RTL1A6NKG5 1358 aa20.46■□□□□ 0.87
RPL13A-214ENST00000624069 PER1O15534 1290 aaPredicted RBP20.45■□□□□ 0.86
RPL13A-214ENST00000624069 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
RPL13A-214ENST00000624069 NBPF6Q5VWK0 638 aa20.44■□□□□ 0.86
RPL13A-214ENST00000624069 SMIM5Q71RC9 77 aa20.44■□□□□ 0.86
RPL13A-214ENST00000624069 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
RPL13A-214ENST00000624069 NBPF4Q96M43 638 aa20.44■□□□□ 0.86
RPL13A-214ENST00000624069 PALLDQ8WX93 1383 aa20.44■□□□□ 0.86
RPL13A-214ENST00000624069 AMPHP49418 695 aa20.43■□□□□ 0.86
RPL13A-214ENST00000624069 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
RPL13A-214ENST00000624069 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
RPL13A-214ENST00000624069 COL13A1Q5TAT6 717 aaPredicted RBP20.42■□□□□ 0.86
RPL13A-214ENST00000624069 AK7Q96M32 723 aa20.42■□□□□ 0.86
RPL13A-214ENST00000624069 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
RPL13A-214ENST00000624069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
RPL13A-214ENST00000624069 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
RPL13A-214ENST00000624069 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
RPL13A-214ENST00000624069 FLT4P35916 1363 aa20.41■□□□□ 0.86
RPL13A-214ENST00000624069 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
RPL13A-214ENST00000624069 PHF14O94880 888 aa20.4■□□□□ 0.86
RPL13A-214ENST00000624069 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
RPL13A-214ENST00000624069 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
RPL13A-214ENST00000624069 EMILIN1Q9Y6C2 1016 aa20.39■□□□□ 0.85
RPL13A-214ENST00000624069 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.85
RPL13A-214ENST00000624069 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
RPL13A-214ENST00000624069 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
RPL13A-214ENST00000624069 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
RPL13A-214ENST00000624069 NMRK2Q9NPI5 230 aa20.38■□□□□ 0.85
RPL13A-214ENST00000624069 SMG6Q86US8 1419 aaKnown RBP20.37■□□□□ 0.85
RPL13A-214ENST00000624069 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
RPL13A-214ENST00000624069 SSFA2P28290 1259 aa20.37■□□□□ 0.85
RPL13A-214ENST00000624069 CNGB1Q14028 1251 aaPredicted RBP20.37■□□□□ 0.85
RPL13A-214ENST00000624069 JMYQ8N9B5 988 aa20.37■□□□□ 0.85
RPL13A-214ENST00000624069 C5P01031 1676 aa20.37■□□□□ 0.85
RPL13A-214ENST00000624069 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
RPL13A-214ENST00000624069 KLRG1Q96E93 195 aa20.36■□□□□ 0.85
RPL13A-214ENST00000624069 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms